Pairwise Alignments

Query, 375 a.a., ABC transporter for branched-chain amino acids, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 378 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  285 bits (730), Expect = 1e-81
 Identities = 155/359 (43%), Positives = 222/359 (61%), Gaps = 6/359 (1%)

Query: 10  KLFAAMVLAGVAGHS-FAADTIKIGIAGPKTGPVTQYGDMQFMGAKQAIADINAKGGVDG 68
           K F A+ +A   G S F    +KIG+AGP TG    +G+    GA+ A   IN  GG++G
Sbjct: 8   KGFLALAVAAALGVSTFVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADVINKAGGING 67

Query: 69  KMLEAKEYDDACDPKQAVAVANKVVN-DGVKFVVGHLCSSSTQPASDIYEDEGVIMITPA 127
           + +     DDAC+PKQAVAVAN++ + D V  VVGH CSS+T PAS++Y++ G+I ITP 
Sbjct: 68  EKIVLVAGDDACEPKQAVAVANRLADQDKVIGVVGHFCSSNTIPASEVYDEAGIIAITPG 127

Query: 128 ATSPEITARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKIVAVLHDKQQYGEGIATAVKQ 187
           +T+P++T RG   +FR  G D  QG  AG+YI D +K K VAV++DK  YG+G+A A   
Sbjct: 128 STNPQVTERGLGAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVINDKDTYGKGLADATAA 187

Query: 188 TLEKKGTKVAVFEGLNAGDKDFSSIIQKLKQANVDFVYYGGYHPELGLILRQAKEKGL-N 246
            L K+G K  + EGL  G+KDFS+++ K++    D VY+GG HPE G ++RQ +E GL +
Sbjct: 188 QLTKRGVKPVLEEGLTRGEKDFSALVTKIRSTGADVVYFGGLHPEAGPLVRQIREAGLKD 247

Query: 247 AKFMGPEGVGNDSISQIAQGAS--EGLLVTLPKSFDTDPANKAIVEEFAKNKQDPTGPFV 304
            KFM  +GV  D +   A GA   +G+ +T        P +KA+VEEF KN  +P G + 
Sbjct: 248 VKFMSDDGVVTDELVATAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFRKNGTEPEG-YT 306

Query: 305 FPAYSAIEVIAGGIKAAKSEDTAKVAEAIHAGTFKTPTGDLSFDAKGDLKDFKFVVYEW 363
             AY++++ +A G   AKS      A+ + A   KT  G+ ++D+KGDLK   +VVY+W
Sbjct: 307 LYAYASVQALAAGFNGAKSNKGEDAAKWLKAHPVKTVMGEKAWDSKGDLKISDYVVYQW 365