Pairwise Alignments

Query, 375 a.a., ABC transporter for branched-chain amino acids, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score =  293 bits (751), Expect = 4e-84
 Identities = 157/359 (43%), Positives = 225/359 (62%), Gaps = 6/359 (1%)

Query: 10  KLFAAMVLAGVAG-HSFAADTIKIGIAGPKTGPVTQYGDMQFMGAKQAIADINAKGGVDG 68
           K F A+ +A   G  S+    +KIG+AGP TG    +G+    GA+ A   INA GGV+G
Sbjct: 8   KGFLALAVATALGVSSYVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVNG 67

Query: 69  KMLEAKEYDDACDPKQAVAVANKVVN-DGVKFVVGHLCSSSTQPASDIYEDEGVIMITPA 127
           + +   + DDAC+PKQAVAVAN++V+ D V  VVGH CSS+T PAS++Y++ GVI ITP 
Sbjct: 68  EKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAITPG 127

Query: 128 ATSPEITARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKIVAVLHDKQQYGEGIATAVKQ 187
           +T+P++T RG   +FR  G D  QG  AG+YI D +K K VAVLHDK  YG+G+A A K 
Sbjct: 128 STNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQGLADATKA 187

Query: 188 TLEKKGTKVAVFEGLNAGDKDFSSIIQKLKQANVDFVYYGGYHPELGLILRQAKEKGL-N 246
            LEK+G K  ++EGL  G+KDFS+++ K++    D VY+GG HPE G ++RQ +E+GL +
Sbjct: 188 QLEKRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLREQGLKD 247

Query: 247 AKFMGPEGVGNDSISQIAQGAS--EGLLVTLPKSFDTDPANKAIVEEFAKNKQDPTGPFV 304
            KFM  +G+  D +   A GA   +G+ +T        P +KA+VEEF K   +P G + 
Sbjct: 248 VKFMSDDGIVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFRKAGTEPEG-YT 306

Query: 305 FPAYSAIEVIAGGIKAAKSEDTAKVAEAIHAGTFKTPTGDLSFDAKGDLKDFKFVVYEW 363
             AY++++ +A     AKS      A+ + A   +T  G+  +D+KGDL    +VVY+W
Sbjct: 307 LYAYASLQALAAAFNGAKSNKGEDAAKWLKANPVQTVMGEKKWDSKGDLTVSDYVVYQW 365