Pairwise Alignments

Query, 375 a.a., ABC transporter for branched-chain amino acids, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 368 a.a., ABC transporter, substrate binding protein (branched chain amino acid) from Agrobacterium fabrum C58

 Score =  254 bits (650), Expect = 2e-72
 Identities = 137/363 (37%), Positives = 205/363 (56%), Gaps = 3/363 (0%)

Query: 7   QISKLFAAMVLAGVAGHSFAADTIKIGIAGPKTGPVTQYGDMQFMGAKQAIADINAKGGV 66
           ++  L +  + A  A    A   I IG+  P TGPV  YGD    GA+ A+++IN KGG+
Sbjct: 2   KLKTLTSVTLAASFAFAPLAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGGI 61

Query: 67  DGKMLEAKEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITP 126
            G+ +  K  DD  +PKQ V+ AN++V +G+ FVVG + S    PASD++ + GV+M+TP
Sbjct: 62  LGEQVVLKLADDGGEPKQGVSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVTP 121

Query: 127 AATSPEITARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKIVAVLHDKQQYGEGIATAVK 186
            AT+P +T RG   +FRT G D  Q   A  Y+  ++K K +A++HDK  YG+G+A + K
Sbjct: 122 TATAPGLTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKGKKIAIIHDKGAYGKGLADSFK 181

Query: 187 QTLEKKGTKVAVFEGLNAGDKDFSSIIQKLKQANVDFVYYGGYHPELGLILRQAKEKGLN 246
            TL   G    +++ L  G+KD  ++  +LK  N D VY+GGYHPE GL++RQ K+ G  
Sbjct: 182 ATLNAGGVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGSK 241

Query: 247 AKFMGPEGVGNDSISQIAQGASEGLLVTLPKSFDTDPANKAIVEEFAKNKQDPTGPFVFP 306
           A  +G +G+ N     I   A EG + T       +  +KA  E   K    P   F   
Sbjct: 242 AAVIGGDGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEAL-KAANIPAEAFTLN 300

Query: 307 AYSAIEVIAGGI-KAAKSEDTAKVAEAIHAG-TFKTPTGDLSFDAKGDLKDFKFVVYEWH 364
           AY+A+EV+  GI KA  ++D+  VA+ + +G  F T  G +++   GDL    F +++W 
Sbjct: 301 AYAAVEVLKAGIEKAGSAKDSEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKWQ 360

Query: 365 FGK 367
            GK
Sbjct: 361 DGK 363