Pairwise Alignments

Query, 307 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

Subject, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  143 bits (361), Expect = 4e-39
 Identities = 89/299 (29%), Positives = 166/299 (55%), Gaps = 12/299 (4%)

Query: 9   QQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIHSL 68
           Q L++G+  G  Y LIA+G+ ++Y     ++FA G++ M+G++ AF   AG+++ G   +
Sbjct: 5   QLLLSGIAQGCIYGLIALGFVLIYKATETVSFAQGDLMMLGAFGAF---AGMSLFG---M 58

Query: 69  PLLMTAAFLASIVVTSAYGYSIERVAYRPLRGSNRLIPLISAIGMSIFLQNTVLLSQDSK 128
           P  + A  + ++V  +A+G  +E V  R + G  +   ++  IG++   +  + +     
Sbjct: 59  PFWLAA--ILAVVAMAAFGVLLELVVIRSILGQPQFSIVMLTIGIAYVARGVITMVPGIG 116

Query: 129 DKSIPNLIPGSFSFGPGGAEEVLISYMQILVFVVTLVAMLGLTLFISRSRLGRACRACAE 188
            ++    +P        G  E++++  Q+ + + T V    L      S+LG A +A ++
Sbjct: 117 TETHTLAVPYKDQIWKLG--ELVVNLEQLAIIIATAVLCGLLFAMFRYSKLGIAMQASSQ 174

Query: 189 DIKMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNAGFLVGLKAFTAAVLG 248
           +   A  +GI    +  L + + AA+AA+A +LL+     ++ N GF +GLKAF AAV+G
Sbjct: 175 NQLAAYYMGIPVKRLNGLVWGLAAAVAAIAGMLLA-PITFVHANMGF-IGLKAFPAAVVG 232

Query: 249 GIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPEVEKV 307
           G GS+PGA++GGLV+G+ E+F      D +KD   + +++L+L+ +P G+ G    +KV
Sbjct: 233 GFGSLPGAIVGGLVIGIVESFAGFYLPDGFKDTAPYIVVLLMLMIKPNGLFGEKLRKKV 291