Pairwise Alignments

Query, 233 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 236 a.a., High-affinity branched-chain amino acid transport ATP-binding protein LivF from Xanthobacter sp. DMC5

 Score =  203 bits (517), Expect = 2e-57
 Identities = 99/233 (42%), Positives = 153/233 (65%), Gaps = 1/233 (0%)

Query: 1   MLQFENVSTFYGKIQALHSVNVEVRQGEIVTLIGANGAGKSTLLMTLCGSPQAHSGSIRY 60
           +L  E + + YG +Q L  V++EV +GE V ++G NGAGKSTLL T+ G     +G+I +
Sbjct: 3   LLSVEGIRSGYGSLQVLSEVSIEVAEGEAVAILGPNGAGKSTLLRTISGLITPTAGAISF 62

Query: 61  MGEELVGQQSSQIMRKSIAVVPEGRRVFSRLTVEENLAMGGF-FTDKGDYQEQMDKVLHL 119
            G +L+   + +I    +  VPE R +F  L+V ENL +GG     +G  +  +D +  +
Sbjct: 63  DGHDLLAMPAHRIPHAGLVQVPEARHIFPSLSVRENLLVGGTPLPTRGAREAALDDIWRI 122

Query: 120 FPRLKERFSQRGGTMSGGEQQMLAIGRALMSKPKLLLLDEPSLGLAPIIIQQIFDIIEQL 179
           FP L  +     GT+SGG+QQM+AIGRALMS+P+L++LDEPSLGLAP++++++++++  L
Sbjct: 123 FPMLVTKRDAPAGTLSGGQQQMVAIGRALMSRPRLVMLDEPSLGLAPLVVRELYEVLRSL 182

Query: 180 RKDGVTVFLVEQNANQALKIADRAYVLENGRVVMQGTGEQLLTDPKVREAYLG 232
            + G+T+ LVEQ+   AL +  RAYV+ENG + + GT  +L     VR+AYLG
Sbjct: 183 VQSGLTLLLVEQDVPVALSLVSRAYVVENGSIALSGTASELRESDHVRQAYLG 235