Pairwise Alignments

Query, 306 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., CnmA from Pseudomonas putida KT2440

 Score =  114 bits (284), Expect = 4e-30
 Identities = 83/294 (28%), Positives = 135/294 (45%), Gaps = 8/294 (2%)

Query: 3   LPDMNLLVALDALLDEGSVVGAARRMNLSPAAMSRTLTRIREAVGDPILVRAGRGLVPTP 62
           LP+  LL   D L    SV  AA ++  S   +S  L R+RE + DP+ VR   G+ PTP
Sbjct: 7   LPEPKLLQLFDVLYQCRSVTRAAEQLGQSQPTISIWLARLREQLNDPLFVRTPGGMAPTP 66

Query: 63  KALQLQGQVRNVVEQAALLFRSADQVDLSTLRRRFSVRANDFFIGVYGGRLFDTMERMAP 122
           +A QL G  R V+E    L     Q   +T +RRF +  +D         + + +   AP
Sbjct: 67  RADQLIGPCREVLESLRRLTAWEPQFIAATAQRRFRLCVSDASHITLLPSILNHLRSHAP 126

Query: 123 LCELCFVPEGDTDDEALREGRLDLRVSNTMPVTPEVKVQNLFSTTFVGLAREDHPLFDED 182
              L         + AL  G  DL +     +   +  Q LF   +V L+   HP   + 
Sbjct: 127 GIRLEAARIDGNTESALESGEADLAIGFVPWLGGGMYQQVLFEQDWVCLSNPQHPRLGDG 186

Query: 183 ITAARFASYSHISISRRGIARGPIDTALSAQGLERRVAMIAPGFHGAMFMLPDSDLLLPV 242
           ++  R+ +  H+ IS  G  +  ++  L+  G+ERR+ +  P F G   ++  +DLL  +
Sbjct: 187 MSLERYRAEGHVQIS-FGTGQKLLEAGLARAGIERRIMLELPAFLGLGKIIGTTDLLGTL 245

Query: 243 PK---EALLSANRLKLPLRSFALPISLPTLVLAQSWHPRFDKDPAHKWLRETMR 293
           P+   + L   + L++       P  +    + Q WH R+ +D  ++WLRE +R
Sbjct: 246 PRHIGQTLADMHGLQV----HDCPFEVEGFTVKQHWHARYHQDNGNRWLREVVR 295