Pairwise Alignments

Query, 397 a.a., pH-dependent sodium/proton antiporter from Pseudomonas simiae WCS417

Subject, 404 a.a., Na+/H+ antiporter NhaA type from Sphingobium sp. HT1-2

 Score =  374 bits (959), Expect = e-108
 Identities = 205/401 (51%), Positives = 267/401 (66%), Gaps = 15/401 (3%)

Query: 5   STFTRFFQLEAASGLLLIAAAALALIINNSP--LSHLYAAFLDV---PVVAQ-IGALKIA 58
           S    F + EA SG+LL+ +AA+A+I+ N P    H+Y     +   PV+A  +G + I 
Sbjct: 7   SALRNFLKGEAGSGVLLMISAAIAMIMANLPGAAGHVYHDIFHMVTGPVLAPALGPMTIH 66

Query: 59  KPALLWINDGLMALFFLLIGLEVKRELLDGHLSKPSQVVLPGAAAIGGMVVPALIYWAIN 118
               LW+NDGLMA+FFLL+GLE+KRE +DG LS   +  LP  AA  GM+ PAL+Y A+ 
Sbjct: 67  ----LWVNDGLMAIFFLLVGLEIKREFVDGGLSTWERRRLPFIAAGAGMIAPALVYLAVT 122

Query: 119 KDYPAALSGWAIPMATDIAFALGVLALLGKRVPVSLKLFLMTLAIIDDLGAIIVIAVFYS 178
              PA   GWAIP ATDIAFA+GVLALLG R P S+KLFL  +AI+DD+GA+ +IA+ YS
Sbjct: 123 AGEPALARGWAIPAATDIAFAIGVLALLGSRAPASIKLFLTAVAIVDDMGAVAIIALAYS 182

Query: 179 ADLSGAALAGAAACLVALIAMNRLGVIKLGPYLIIGLILWVCVLKSGVHATLAGVTLAFC 238
             L   ALAGA   L+ +  MNR+GV  L PYLI  L+LW  +L SGVHAT+AGV  A  
Sbjct: 183 QGLDVMALAGAFVVLLVMFGMNRVGVRALAPYLIGFLLLWYLMLLSGVHATIAGVLAAIT 242

Query: 239 IPMRTKNAEP----SPLLTLEHALHPWVAYGILPLFAFANAGVSLTGVSLESFTHHVPMG 294
           IP+      P    SPL  LEH +HPW AY I+PLF FANAG++L G ++ +    +P+G
Sbjct: 243 IPVNRTPGAPDAVDSPLHRLEHLIHPWSAYLIVPLFGFANAGITLNGEAIGALLSPLPIG 302

Query: 295 IAAGLLIGKTVGVFGLTWLAIKTGLAALPNGANWGQVFGVAILCGIGFTMSLFVGSLAFV 354
           +A GLL+GK +GVFG  WLA K G+AA P+GA W Q++G+A+LCGIGFTMSLF+G+LAF 
Sbjct: 303 VALGLLLGKQLGVFGSIWLAQKLGIAARPSGATWVQIYGMALLCGIGFTMSLFIGALAF- 361

Query: 355 PGASEFAGEDRMGILTGSILAACIGYAVTAMASRKKAETSG 395
           PG      E ++GIL GS+L+A  GYAV   A   ++   G
Sbjct: 362 PGQPLLVEEAKIGILGGSLLSALCGYAVLRFAPTPRSVARG 402