Pairwise Alignments

Query, 397 a.a., pH-dependent sodium/proton antiporter from Pseudomonas simiae WCS417

Subject, 453 a.a., Na(+)/H(+) antiporter NhaA 2 from Pseudomonas putida KT2440

 Score =  301 bits (771), Expect = 2e-86
 Identities = 172/433 (39%), Positives = 251/433 (57%), Gaps = 50/433 (11%)

Query: 9   RFFQLEAASGLLLIAAAALALIINNSPLSHLYAAFLDVPVVAQIGALKIAKPALLWINDG 68
           RF  +EA SG++L+ AA  ALI  NSP +  Y A    P+   +G+   ++    WINDG
Sbjct: 22  RFLHIEAVSGIVLLIAAVAALIWANSPAADSYEALWHTPLTFGVGSHVYSQSLHFWINDG 81

Query: 69  LMALFFLLIGLEVKRELLDGHLSKPSQVVLPGAAAIGGMVVPALIYWAINKDYPAALSGW 128
           LM +FFL++G+E++RE+ +G LS   Q  LP AAA+GG+ VPAL+Y +     PA   GW
Sbjct: 82  LMTIFFLVVGMEIRREIHEGALSSLRQATLPMAAAVGGVAVPALLYLSFGHA-PADQQGW 140

Query: 129 AIPMATDIAFALGVLALLGKRVPVSLKLFLMTLAIIDDLGAIIVIAVFYSADLSGAALAG 188
           A+P ATDIAFA+GVLALLGK +P ++++FL+ LAIIDD+ A+++IA FYS  L       
Sbjct: 141 AVPTATDIAFAVGVLALLGKSIPSNVRVFLLALAIIDDIIAVLIIAFFYSGGLDYTGFGV 200

Query: 189 AAACLVALIAMNRLGVIKLGPYLIIGLILWVCVLKSGVHATLAGVTLAFCIPM------- 241
           A   L+ +I + ++GV     Y+I G I+W+ +L +G H TLAGV L    P+       
Sbjct: 201 AVIGLLMVIGLQKIGVGSAYAYVIPGAIVWLGILLTGAHPTLAGVVLGLMTPVTAMPMRE 260

Query: 242 ---------------RTKNAEPS--------------------PLLTLEHALHPWVAYGI 266
                          R K  E                      P++ ++  LHPWVA+GI
Sbjct: 261 RPLDAITRFTGELLGRAKAPEQDASDLMDPLKRLRLAQRELLPPVVRMQGTLHPWVAFGI 320

Query: 267 LPLFAFANAGVSLTGVSLES-FTHHVPMGIAAGLLIGKTVGVFGLTWLAIKTGLAALPNG 325
           +P+FA ANAGVSL+GV L +     V + +A  L+ GK +G+  ++WL ++ G   LP  
Sbjct: 321 MPVFALANAGVSLSGVDLSAEGPQWVMIAVAVALVAGKPLGIVSVSWLMVRLGWCVLPAE 380

Query: 326 ANWGQVFGVAILCGIGFTMSLFVGSLAFV-PGASEFAGEDRMGILTGSILAACIG--YAV 382
            NW  +  V +L GIGFTMS+F+ +LAFV PG+    G  ++G+L+ S++AA +G  + V
Sbjct: 381 VNWRSIMLVGLLAGIGFTMSIFIANLAFVDPGS---LGAAKLGVLSASLIAAVLGLTWGV 437

Query: 383 TAMASRKKAETSG 395
            +M S   A  +G
Sbjct: 438 WSMRSAASATKAG 450