Pairwise Alignments

Query, 231 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 230 a.a., OmpA family protein from Pseudomonas putida KT2440

 Score =  379 bits (974), Expect = e-110
 Identities = 185/231 (80%), Positives = 209/231 (90%), Gaps = 1/231 (0%)

Query: 1   MSIMRTALPLVLLTGVLTGCAGLQKTDWPTCAAIGGVTGAAIGATESSAYAGAGALLIGG 60
           MSI+RTALPLVLLT VLTGCAGLQKTDWP CAA+GGV GAA+GA ESS++AG GALL GG
Sbjct: 1   MSIVRTALPLVLLTSVLTGCAGLQKTDWPKCAAVGGVGGAALGAIESSSWAGWGALLGGG 60

Query: 61  MAGAYCWVHGDGDEDGDGVPDSRDKCPGTPKGVQVDANGCPPTPPPAVVEEVLVVKEETI 120
           +A  YCW HGDGDEDGDGVPDSRDKCPGTP+GVQVDANGCPP P  AVVEEV+V KEE I
Sbjct: 61  LAAGYCWAHGDGDEDGDGVPDSRDKCPGTPRGVQVDANGCPPEPV-AVVEEVVVQKEEVI 119

Query: 121 VIRDVHFQFDSAKLTAADKTNLDTIATRLKQEAPTAQLRVSGHTDSVGNDAYNQKLSDKR 180
           VIRDVHF+FDSA+LTA+DK  L+TIATRLKQEAP+A+L VSGHTDSVG+D+YNQKLS++R
Sbjct: 120 VIRDVHFEFDSARLTASDKERLNTIATRLKQEAPSARLSVSGHTDSVGSDSYNQKLSERR 179

Query: 181 AHSVTDYLIGAGVPRSNFVSVTGAGESHPVADNKTAEGRALNRRTEIQINR 231
           AHSVTDYL+ +GVPRS+FVSV GAGE+ PVADN TAEGRA+NRRTEI+I R
Sbjct: 180 AHSVTDYLVESGVPRSSFVSVVGAGETQPVADNATAEGRAMNRRTEIKIQR 230