Pairwise Alignments

Query, 544 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

Subject, 552 a.a., putative DNA ligase, ATP-dependent from Pseudomonas putida KT2440

 Score =  811 bits (2096), Expect = 0.0
 Identities = 404/551 (73%), Positives = 460/551 (83%), Gaps = 8/551 (1%)

Query: 1   MKAFAELYANLDATTSSNAKLAALQAYFQDAAPEDAAWAVYFLSGGRPRQLVPTRLLRDM 60
           MKAFA L+  LDATTSSNAKL AL+ YF  A  EDAAWAVYFL+GGRPRQLVPTRLLR++
Sbjct: 1   MKAFATLFLRLDATTSSNAKLEALRDYFDMAPAEDAAWAVYFLAGGRPRQLVPTRLLREL 60

Query: 61  ATEASGIEPWLFEESYQSVGDLAETISLLLPESTYTSEDGLAVWLEEKLLPLRGLPPLEL 120
           AT  +G+  WLFEESYQ+VGDLAETISLLLP     +E+GLA W+E+ LLPLRGL P ++
Sbjct: 61  ATTLAGLPDWLFEESYQAVGDLAETISLLLPLHADGNEEGLATWVEQHLLPLRGLTPEQV 120

Query: 121 AERLPALWSQLDQPSLMVCIKLITGSFRVGVSKLLVTRALAAMADLDSKRVAQRLVGYTD 180
            +RLP LW++LD+ SLM+C+KLITGSFRVGVSKLLVTRALA +A LD+KRVAQRLVGYTD
Sbjct: 121 RQRLPPLWARLDRASLMLCLKLITGSFRVGVSKLLVTRALAQLAGLDAKRVAQRLVGYTD 180

Query: 181 LSNRPTAQGYLKLIAAESPDEHAQRGGQPYPFFLAHGLSQPVEQFHDLLGSPADWQVEWK 240
           + +RPTA  Y +LIA ES DEH QRGGQPYPFFLAH L    +QF  LLG P+DWQ+EWK
Sbjct: 181 IGHRPTAASYQRLIAPESADEHNQRGGQPYPFFLAHPLQVSSDQFDTLLGPPSDWQIEWK 240

Query: 241 WDGIRAQLVKREGRLWIWSRGEELVTERFPELHSLVSGLPDGTVIDGEIVVWKD------ 294
           WDGIRAQ+VKR+G+LW+WSRGEELVTERFPELH L   LPDG V+DGEI+VWK       
Sbjct: 241 WDGIRAQVVKRDGQLWVWSRGEELVTERFPELHGLAQTLPDGVVLDGEILVWKPGETETE 300

Query: 295 -TVQPFALLQQRIGRKTLSKKVLEDAPVAVLAYDLLEHQGDDWRNHTQAERRTQLERVIA 353
             VQPFALLQQRIGRKTL KK+L DAPV + AYDLLE QG+DWR+  Q ERR+QLE ++ 
Sbjct: 301 LAVQPFALLQQRIGRKTLGKKLLNDAPVVLQAYDLLEWQGEDWRSRPQHERRSQLEHLVD 360

Query: 354 QCNQPVLVASALLTGATWEALAKQREASRSLGVEGMMLKARDGLYGVGRTKDMGVWWKWK 413
           +     ++ S LL G  W  LA+QRE SRSLGVEG+MLK R+ LYGVGRTKDMG+WWKWK
Sbjct: 361 EHPLAPVLLSPLLQGPDWADLARQREQSRSLGVEGLMLKQREALYGVGRTKDMGIWWKWK 420

Query: 414 VDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDGPPGSE-RTLVPFAKAYSGLTDEEMRK 472
           +DPFSVDAVLIYAQRGHGRRASLYSDYTFAVWD P G+  R LVPFAKAYSGL+DEEMRK
Sbjct: 421 IDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDAPAGTPGRALVPFAKAYSGLSDEEMRK 480

Query: 473 VDAIVRKTTVEKFGPVSSVTPSMVFELGFEGIALSKRHKSGIAVRFPRMLRWRQDKSVEE 532
           VDAI+RKTTVE FGPV SVTP++VFELGFEGIALS+RHKSGIAVRFPRMLRWR DK VEE
Sbjct: 481 VDAIIRKTTVETFGPVRSVTPTLVFELGFEGIALSRRHKSGIAVRFPRMLRWRLDKPVEE 540

Query: 533 ADNLATLQNLL 543
           AD+LATLQ LL
Sbjct: 541 ADDLATLQALL 551