Pairwise Alignments

Query, 259 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  189 bits (480), Expect = 5e-53
 Identities = 100/251 (39%), Positives = 147/251 (58%), Gaps = 4/251 (1%)

Query: 3   KALLTLSALALCMAAGSTLAKEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAE 62
           K L  L ALAL + +  + A E K L+ G++ +Y PF  K  DGS+ GFD D+GNA+C E
Sbjct: 2   KKLALLGALALSVFSLVSQAAE-KPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEE 60

Query: 63  LKVKCKWVESDFDGMIPGLKANKFDGVISSMTVTPVREKAIDFSSELFSGPTSLVFKKGA 122
           +K KC WVE +FDG+IP LK  K D ++SSM++T  R+K++DF+   +  P  LV K G 
Sbjct: 61  MKTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDGT 120

Query: 123 GYS-TPESLKGKSVGYEQGTIQEAYAKAVLDKAGVTTKAYANQDQVYADLTSGRLDASVQ 181
             S + + LKGK +G ++G+I + +AK VL   G T   Y  Q+++Y D+ +GRLD +V 
Sbjct: 121 TVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTVA 180

Query: 182 DMLQAELGFLKSPAGAGYEV--SAAIDDPLLPSKTAIGIKKGNTELKTLLDKGIKALHDD 239
           D    E GFLK+ AG G+     A  D         I ++KG+      ++  I A+  +
Sbjct: 181 DATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRAN 240

Query: 240 GTYATIQKKHF 250
           G Y  I+ K+F
Sbjct: 241 GKYKEIESKYF 251