Pairwise Alignments

Query, 259 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 243 a.a., arginine transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  134 bits (336), Expect = 2e-36
 Identities = 82/250 (32%), Positives = 123/250 (49%), Gaps = 9/250 (3%)

Query: 1   MKKALLTLSALALCMAAGSTLAKEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAIC 60
           MKK  L L+AL      G++ A++   + FGV  +Y PFES  A+  +VGFDIDL  A+C
Sbjct: 1   MKK--LVLAALLASFTFGASAAEK---INFGVSATYPPFESIGANNEIVGFDIDLAKALC 55

Query: 61  AELKVKCKWVESDFDGMIPGLKANKFDGVISSMTVTPVREKAIDFSSELFSGPTSLVFKK 120
            +++ +C +    FD +IP LK  K+D VIS M +TP R K + F++  +     ++ KK
Sbjct: 56  KQMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYYENSAVVIAKK 115

Query: 121 GAGYSTPESLKGKSVGYEQGTIQEAYAKAVLDKAGVTTKAYANQDQVYADLTSGRLDASV 180
              Y T   LKGK +G E GT  + Y +       V T +Y +    + DL +GR+D   
Sbjct: 116 DT-YKTFADLKGKRIGMENGTTHQKYIQD--QHPEVKTVSYDSYQNAFIDLKNGRIDGVF 172

Query: 181 QDMLQAELGFLKSPAGAGYEVSAAIDDPLLPSKTAIGIKKGNTELKTLLDKGIKALHDDG 240
            D       +LK+    G       D     +   I ++  N  L   L+  + A+  DG
Sbjct: 173 GDTAVVN-EWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADG 231

Query: 241 TYATIQKKHF 250
           TY  I  + F
Sbjct: 232 TYQKISDQWF 241