Pairwise Alignments

Query, 826 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

Subject, 557 a.a., RNA helicase from Pseudomonas simiae WCS417

 Score = 63.2 bits (152), Expect = 4e-14
 Identities = 100/388 (25%), Positives = 162/388 (41%), Gaps = 41/388 (10%)

Query: 13  AAKGWK-PFAFQKEVWAAVKSGQSGLLHASTGAGKTYALWFAALNRFAIARPPVTAKRKP 71
           AA G++ P A Q++    + +G+  +  A TG GKT A     L+          AKR+P
Sbjct: 22  AATGYEEPSAIQQQSIPIIMAGKDMIGQAQTGTGKTAAFALPILHCID------PAKREP 75

Query: 72  PAEPLTVLWITPMRALAADTARALEAPLEALQIPW-SVGLRTGDTSSSERARQTRRQPTV 130
            A     L + P R LA   A A E    A Q+P  +V    G      + +  R    +
Sbjct: 76  QA-----LILAPTRELALQVATAFET--YAKQMPGVTVVAVYGGAPMGPQLKAIRNGAQI 128

Query: 131 LVTTPESLTLMLARADSEVSLAHLRMVVVDEWHELIGNKRGVQLQLALARLRRWHPDLMV 190
           +V TP  L   L R   E  L+ +  +V+DE  E++  K G    L +   +   P    
Sbjct: 129 VVATPGRLCDHLRR--DEKVLSTVNHLVLDEADEML--KLGFMDDLEVI-FKALPPTRQT 183

Query: 191 WGISATLGNQAHAL---EVLVPQGDGINVQGQTAKQLIIDTLLPPVTERFPWAGHIGLKM 247
              SATL     A+    +  P+   I  + QT   +    LL    ++        L +
Sbjct: 184 VLFSATLPQSIRAIAERHLRDPEHVKIQTKTQTVTAIEQAHLLVHADQKTSAV----LSL 239

Query: 248 LPQVVAEVDASSSCLVFTNTRAQSEIWFQALLDARPDWAGVIALHHGSLSRETRDWVERA 307
           L     EV+   + ++F  T+ Q+ +   + L+A+   A  +   +G +++  R+ V  +
Sbjct: 240 L-----EVEDFDALIMFVRTK-QATLDLASALEAKGYKAAAL---NGDIAQNQRERVIDS 290

Query: 308 LKDGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRPSRVTLVP 367
           LKDG+L  VV T     G+D   +  V  +         + R GR+G A GR  R  L+ 
Sbjct: 291 LKDGRLDIVVATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRA-GREGRALLLV 349

Query: 368 T----HSLELVEAAAAQDAIAQRRIEAR 391
           T      L+++E    Q     R  +A+
Sbjct: 350 TPRERRMLQVIERVTGQKVAEVRLPDAQ 377