Pairwise Alignments

Query, 826 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

Subject, 559 a.a., ATP-dependent DEAD-box RNA helicase DeaD from Pseudomonas putida KT2440

 Score = 70.5 bits (171), Expect = 2e-16
 Identities = 99/398 (24%), Positives = 171/398 (42%), Gaps = 44/398 (11%)

Query: 18  KPFAFQKEVWAAVKSGQSGLLHASTGAGKTYALWFAALNRFAIARPPVTAKRKPPAEPLT 77
           +P A Q++    + +G   +  A TG GKT A     LN+  ++      KR+P A    
Sbjct: 28  EPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILNKIDVS------KREPQA---- 77

Query: 78  VLWITPMRALAADTARALEAPLEALQIPW-SVGLRTGDTSSSERARQTRRQPTVLVTTPE 136
            L + P R LA   A A E    A Q+P  +V    G      + R  R    ++V TP 
Sbjct: 78  -LILAPTRELALQVATAFET--YAKQMPGVNVVAVYGGAPMGPQLRAIRNGAQIVVATPG 134

Query: 137 SLTLMLARADSEVSLAHLRMVVVDEWHELIGNKRGVQLQLALARLRRWHPDLMVWGISAT 196
            L   L R   E  L+ ++ +V+DE  E++       L++    +      ++    SAT
Sbjct: 135 RLCDHLRR--DEKVLSTVQYLVLDEADEMLKLGFMDDLEVIFDAIPATRQTVL---FSAT 189

Query: 197 LGNQAHAL---EVLVPQGDGINVQGQTAKQLIIDTLLPPVTERFPWAGHIGLKMLPQVVA 253
           L +   ++    +  P+   I  + QT   +    L+    ++ P      L++L     
Sbjct: 190 LPSSIRSIAERHLREPKHVKIQTKTQTVTAIEQAHLMVHADQKIPAV----LRLL----- 240

Query: 254 EVDASSSCLVFTNTRAQSEIWFQALLDARPDWAGVIALHHGSLSRETRDWVERALKDGQL 313
           EV+   + + F  T+ Q+ +   A L+A+   A  +   +G +++  R+ V  +LKDG+L
Sbjct: 241 EVEEFDALIAFVRTK-QATLDLAAALEAKGYKAAAL---NGDIAQNQRERVIDSLKDGRL 296

Query: 314 KAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRPSRVTLVPT----H 369
             VV T     G+D   +  V  +         + R GR+G A GR  R  L+ T     
Sbjct: 297 DIVVATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRA-GRDGRALLLVTPRERR 355

Query: 370 SLELVEAAAAQDAIAQRRIEARESPYKPLDVLVQHLVS 407
            L+++E    Q  +A+ R+   ++    LD  ++ L S
Sbjct: 356 MLQVIERVTGQ-KVAEARLPNAQA---VLDARIKKLTS 389