Pairwise Alignments

Query, 826 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

Subject, 816 a.a., ATP-dependent helicase, DEAD box family from Pseudomonas putida KT2440

 Score = 1139 bits (2947), Expect = 0.0
 Identities = 575/827 (69%), Positives = 676/827 (81%), Gaps = 14/827 (1%)

Query: 1   MAKATDFAKRWFAAKGWKPFAFQKEVWAAVKSGQSGLLHASTGAGKTYALWFAALNRFAI 60
           M  ATD A  WFA +GWKPFAFQ+ VWAAV+ G+SGLLHASTGAGKTYA+W AAL  F  
Sbjct: 1   MPAATDLANAWFAKRGWKPFAFQRRVWAAVERGESGLLHASTGAGKTYAVWLAALRAF-- 58

Query: 61  ARPPVTAKRKPPAE---PLTVLWITPMRALAADTARALEAPLEALQIPWSVGLRTGDTSS 117
                  K +P      P+ VLW+TPMRALAADTARAL+APL+ LQ+PWSVG+R+GDT+S
Sbjct: 59  -------KPRPQGRHLAPIQVLWVTPMRALAADTARALQAPLDELQLPWSVGVRSGDTNS 111

Query: 118 SERARQTRRQPTVLVTTPESLTLMLARADSEVSLAHLRMVVVDEWHELIGNKRGVQLQLA 177
           +ERARQ RR P+VL+TTPESLTL+L RA +    A L++VVVDEWHEL+GNKRGVQLQLA
Sbjct: 112 AERARQARRLPSVLITTPESLTLLLTRAKAREDFATLQLVVVDEWHELLGNKRGVQLQLA 171

Query: 178 LARLRRWHPDLMVWGISATLGNQAHALEVLVPQGDGINVQGQTAKQLIIDTLLPPVTERF 237
           LARLR WHP L  WG+SATLGN  HA +VL+PQG G+ VQG+  K L +DTLLP   ERF
Sbjct: 172 LARLRHWHPGLPTWGLSATLGNLQHARDVLLPQG-GLLVQGRQDKALQVDTLLPKAIERF 230

Query: 238 PWAGHIGLKMLPQVVAEVDASSSCLVFTNTRAQSEIWFQALLDARPDWAGVIALHHGSLS 297
           PWAGH+GLKML QV  E+DAS+S LVFTNTRAQ+EIW+QALL+ARPDWAG+IALHH SL+
Sbjct: 231 PWAGHMGLKMLDQVCHEIDASASSLVFTNTRAQAEIWYQALLEARPDWAGLIALHHASLA 290

Query: 298 RETRDWVERALKDGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAP 357
           R+TRDWVER+LK G LKAV+CTSSLDLGVDFLPVERVLQIGSAKG+ARLMQRAGRSGHAP
Sbjct: 291 RDTRDWVERSLKQGSLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLMQRAGRSGHAP 350

Query: 358 GRPSRVTLVPTHSLELVEAAAAQDAIAQRRIEARESPYKPLDVLVQHLVSMALGGGYKPD 417
           GR SRVTLVPTHSLELVEAAAA+ A+    IEAR SP   +DVLVQHLVSMALG G++P+
Sbjct: 351 GRRSRVTLVPTHSLELVEAAAARQALLAGHIEARFSPRLCMDVLVQHLVSMALGSGFRPE 410

Query: 418 DLLVEVRGAWAYHDLTDEDWAWALGFVRHGGLSLTAYPDYRRVEPDEHGIWRVPDARLAR 477
            LL EVR  WA+  L D  W WAL FV HGG SLTAYPDY+RVE    G++RV   RLAR
Sbjct: 411 QLLAEVRSTWAFRQLRDSQWQWALDFVCHGGSSLTAYPDYQRVERQADGVYRVTSERLAR 470

Query: 478 RHRMSVGTIVSDASIHLKFWSKGGGGKNLGSVEEGFIARLKPGDGFLFAGRLLELVRVEN 537
           RHRM +GTIVSDA++ LK+WSKGGGGK LGSVEE FIARL+PGD  +FAGR+LELVRVEN
Sbjct: 471 RHRMGIGTIVSDANLQLKYWSKGGGGKTLGSVEEAFIARLRPGDTLVFAGRVLELVRVEN 530

Query: 538 MTAYVRRSNAKKAAVPRWNGGRMPLSNELAQAVVERFDAAAQGHFEGPEMQAVRPLLQTQ 597
           MTAYVRRS A+KAAV RWNGGRMPLS+ELA A+VE+ DAAA   FEGPEM+AVRPLL  Q
Sbjct: 531 MTAYVRRSTARKAAVARWNGGRMPLSSELADALVEQLDAAAHERFEGPEMRAVRPLLALQ 590

Query: 598 VRWSGLPTREHLLAEALKSREGWHLFLYPFAGRQVHLGLASLLAWRVSQGQAVTFSIAVN 657
            +WS LPT   LLAE  KSR+GWHLFLYPFAGR  +LGLA+L+AWRVS+ Q ++ SIAVN
Sbjct: 591 AQWSALPTTSTLLAETFKSRQGWHLFLYPFAGRMANLGLANLIAWRVSRAQPLSVSIAVN 650

Query: 658 DYGLELLSATEVNWPALLNEALLSPEHLLEDVVASLNAGELALRRFREIARIAGLVFAGY 717
           DYG ELLS  +V+W + L +AL + + LLEDV+ASLNAGE+ALRRFREIA+IAGLVF GY
Sbjct: 651 DYGFELLSPAQVDWASHLPQALGTAD-LLEDVLASLNAGEMALRRFREIAQIAGLVFGGY 709

Query: 718 PGAPKSTRQVQASSGLFFEVFKQYDPQNLLLTQAGEEVLRDELDIRRLEQTLRHLCALKL 777
           P A KSTRQ+QASSGLF+EVF+++D  NLLL QA +EVL +EL+I RL + L  +  L+L
Sbjct: 710 PAAQKSTRQIQASSGLFYEVFRKHDAGNLLLGQARDEVLSEELEIERLHRQLLKMSELQL 769

Query: 778 ELHRIQRPTPLAFPLLVERMRESMSSEKLSERIARMVKDLEKVADNG 824
           +L  ++RP PLAF LLVE MRE++S+EKL++RIARMV +LE+ A+ G
Sbjct: 770 DLQALRRPGPLAFALLVEGMRETLSTEKLADRIARMVAELEQAANAG 816