Pairwise Alignments

Query, 341 a.a., nitrate ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 344 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  253 bits (646), Expect = 5e-72
 Identities = 134/343 (39%), Positives = 206/343 (60%), Gaps = 6/343 (1%)

Query: 5   TPFARL--AATVGLGVSLLAGSLVAPTAAQAEG-EIRIAEQFGIVYLLLNVVREQNLIEK 61
           T FA L  A  +   +  LA  ++A   A AE  E+ I++ +GI+YL + V+  + L+EK
Sbjct: 2   TAFATLRRAGVLATALVALASGVLATGPACAEAPELHISKGYGILYLPMIVMEHEKLLEK 61

Query: 62  YGKQQGI-DIKVDWTQLSGGAAVNDALLSGSIDIAGAGVGPLLTIWDRTRG--KQNVKAV 118
             K  G+ D+KV W +L GG  +NDA++SG++DIA  GV   LT+W + +G  K  V  +
Sbjct: 62  QAKAAGLGDVKVGWLELDGGNVINDAMISGNLDIAAIGVPGFLTLWAKVKGNAKLEVSGL 121

Query: 119 ASLGNFPYYLVSNNPKVKTIADFTEQDRIAVPAVGVSVQSRFLQYAAAKQWGDKEFNRLD 178
           A L     YL +NNP +K++ DFT +D+IA+P +  S+ +  LQ A AK++GD  + +LD
Sbjct: 122 AGLSATSLYLNTNNPNIKSLKDFTAKDKIALPGIKTSLSAVVLQMAVAKEFGDDNYAKLD 181

Query: 179 KYTVAVPHPDATAALIAGGTELTGHFSNPPFQDQALANPNVHVVLNTYDLLGPNSPTVLF 238
             TV +PHP+A  +L++G TE+  H  +PP+    L NP VH V+N+ D+LG  S  +++
Sbjct: 182 PMTVGLPHPEAYTSLVSGKTEVNSHLGSPPYSFMELENPQVHRVMNSVDVLGNISLDLVY 241

Query: 239 ATEKFRNDNPKTYTAFVEALTEAAQFAQHDKGAAADTYIRVTKAKIDRAELLKIIDNPQF 298
           A ++F + NPK   AF+ AL EA +    +   AA  Y++  KAK+   E+ ++I +P  
Sbjct: 242 APKRFIDANPKLTAAFLAALEEADKLIADEPARAATIYVQSAKAKLSAEEVERMIKDPDT 301

Query: 299 EFSVTPKNTYPLAEFLYRVGAIKNKPESWKDYFFQDAKPLQGS 341
           +FS TP      A F+ RVG+IK KP +W+D F  +   L GS
Sbjct: 302 KFSTTPNGVMQFANFMGRVGSIKTKPANWQDLFIANVHSLPGS 344