Pairwise Alignments

Query, 1173 a.a., DNA polymerase III subunit alpha from Pseudomonas simiae WCS417

Subject, 1117 a.a., Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) from Variovorax sp. SCN45

 Score =  327 bits (837), Expect = 4e-93
 Identities = 260/948 (27%), Positives = 434/948 (45%), Gaps = 92/948 (9%)

Query: 160  VFPDRFYLEVQRTNRPNDEEHLHAAVALADKLGAPLVATNDVRFIKKEDFEAHETRVCIG 219
            ++ +  +L V+  N  +D+  L   + + ++ G PLVA  DV    +     H+    + 
Sbjct: 201  LYGENLWLAVELFNELDDDLWLVTLMEVGEQAGVPLVAAGDVHMHARSCKPLHDVLTAVR 260

Query: 220  EGRALDDPRRSKNYSEEQYLKSAEEMAELFSDLPEALENSVEIAKRCNI--EVKLGKHFL 277
            EG+ + +   +   + +++L+    +AE+   L   LEN++ +A RCN   EV    +  
Sbjct: 261  EGKTVAECGFALQSNAQRHLRPRMRLAEIH--LRRMLENTLAVAGRCNFDPEVIRENYKY 318

Query: 278  PNFPIPDGMTIDEYFRKVSFDGLEERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQM 337
            P   +    T  +   + +++G   R     P+   +   A+ Q        ELDIII +
Sbjct: 319  PLETLGSDETPAQTLVRKTWEGARGRY----PEGIPDKVRAQVQK-------ELDIIIDL 367

Query: 338  GFPGYFLIVMDFIQWAKNNGVPVGPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPE 397
             +  +FL V + + +A++  + +  GRGS A S V +   IT +DP +  LLFERFL+ E
Sbjct: 368  KYEMFFLTVENIVSFARSQKI-LCQGRGSSANSAVCFCLGITAIDPTKGHLLFERFLSRE 426

Query: 398  RVSMPDFDVDFCMDGRDRVIEYVAEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGL 457
            R   PD DVDF    R+ VI+Y+  KYGR+  +         +++ +RDV +  G    L
Sbjct: 427  RHEPPDIDVDFEHQRREEVIQYIYAKYGRHRAAIAAVVICYRSRSALRDVGKAIGIDERL 486

Query: 458  ADRLSK----MIPFEVGMTLEKAYEQEEILRDFIKIDEEAAEIW-DMARKLEGVVRNVGK 512
             D  +K         +G  L +A  +  ++ D +K+       W +M +KL+G  R++ +
Sbjct: 487  IDEFAKDHYWFDDTVLGEQLRQAQARVGVVEDELKLVH-----WIEMTQKLKGFPRHLSQ 541

Query: 513  HAGGVVIAPTKLTDFSPIYCDEEGGGLVTQFDKDDVEAAGLVKFDFLGLRTLTIIDWALK 572
            H GG V+  T+LT   P+         V Q++KDD+EA G++K D L L  L+ I   L+
Sbjct: 542  HVGGFVLTHTRLTRLVPVEKASMKDRSVIQWEKDDLEAMGMLKVDVLALGMLSAIRRGLE 601

Query: 573  TINRDRAKVNEEPLDIAFIPLDDKPTYTLLQKAETTAVFQLESRGMKELIKKLKPDCLED 632
             +NR R       +++  IP DD+  + ++  A+T  VFQ+ESR    ++ +LKP   ED
Sbjct: 602  HMNRWRGST----IEMHQIPNDDQKVFDMICDADTIGVFQIESRAQMSMLPRLKPRTYED 657

Query: 633  LIALVALFRPGPLQSGMVDDFINRKHGRAELAYPHSDYQYEGLKPVLAPTYGIILYQEQV 692
            L+  VA+ RPGP+Q GMV  ++ ++  R     P   Y+ E L+  L  T GI ++QEQV
Sbjct: 658  LVIEVAIVRPGPIQGGMVHPYLKQRE-RVRKGLP-IHYEKEELREALERTLGIPIFQEQV 715

Query: 693  MQIAQVMAGYTLGGADMLRRAMGK-KKPEEMAKQRGGFIEGCATNNIDADLAGNIFDLVE 751
            MQIA + A +T   AD LRRAM   K+   + K     + G   N   A  A  IF  V 
Sbjct: 716  MQIAMIAAKFTADEADQLRRAMAAWKRKGGLGKFHDKLVNGMTLNGYKASFAEAIFKQVM 775

Query: 752  KFAGYGFNKSHSAAYGLVSYQTAWLKAHYPAPFMAAVLSADMHNTDKVVTLIEEVRTMKL 811
             F  YGF +SH+A++ L+   ++WLK + PA F+AA+L +          L+++ R   +
Sbjct: 776  GFGDYGFPESHAASFALLVTVSSWLKNYEPACFLAALLDSQPMGFYSPSQLVQDARRHGV 835

Query: 812  RLDAPDVNASEFKFTVN-----------------------DEGRIIYGLGAIKGVGEGPV 848
             +   DV  S+F  T+                        ++  +  GL  I G   G V
Sbjct: 836  EVRPVDVTRSDFDTTLEAREPDAPRPSGIDERYADRLGNENQPAVRLGLNRIAGFSAGGV 895

Query: 849  EAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEPKAYQANID 908
            E + +AR   PF    D   R +L+    + +  L  + AL  L    H   + + A   
Sbjct: 896  ERLLKARAAAPFTSTEDLALRAELEG---KDMAALAAADALMSLSG--HRRQQVWDATAQ 950

Query: 909  RNRAVLLTAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYGNHRKAKELTLKERLK 968
            R    LL                          G+ + E A +     + +E+       
Sbjct: 951  RRAPALLR-------------------------GVPINEQALLLPAASEGEEIV------ 979

Query: 969  GEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVMKNKKGDKM 1028
            G+  +L L L  HP+      + R       +L+   + QT     I     + +  +  
Sbjct: 980  GDYASLRLTLRRHPLALLRPRLARMKLMSAAELRSVPNGQTARACGIVKGRQRPQTANGT 1039

Query: 1029 GFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGG 1076
             F+TL+D +G +   +++    + +  L    ++ V+G    DD +GG
Sbjct: 1040 IFVTLEDETGNVNVIVWSHVIEAWREPLLKSHLLAVQGTWQRDDETGG 1087