Pairwise Alignments

Query, 1173 a.a., DNA polymerase III subunit alpha from Pseudomonas simiae WCS417

Subject, 1022 a.a., error-prone DNA polymerase from Magnetospirillum magneticum AMB-1

 Score =  380 bits (975), Expect = e-109
 Identities = 311/1075 (28%), Positives = 490/1075 (45%), Gaps = 95/1075 (8%)

Query: 5    FVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAGIKPI 64
            +  L+  + Y+ ++G      L  T   + + A+A+ D+N +  +V+ +  A  AGI+ +
Sbjct: 4    YAELQTLSNYTFLEGASHADELAITASALGLEAIAICDRNTLSGIVRAHVAAKAAGIRLV 63

Query: 65   CGADLWLSNKDPDNPLSRISLLAMNGVGYRNLTELISRGFIDGQRNGSIIIEREWVAEAS 124
             GA L L++       + +     +   Y  L+ L++ G     + G   + R  VAE +
Sbjct: 64   VGARLDLTDG------ASLLCFPTDRAAYGRLSRLLTLGRRRAPK-GECHLARADVAEHA 116

Query: 125  EGLIMLSAAKEGEIGIALLGGNPQEAEVLAK--EWMQVFPDRFYLEVQRTNRPNDEEHLH 182
            EG I++           L+  +P E    A+  EW  V  DR YL   R  R +D E L 
Sbjct: 117  EGQILV-----------LIAPDPLEEGFAAQLAEWRTVVGDRLYLAATRRFRGDDGERLR 165

Query: 183  AAVALADKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSKNYSEEQYLKSA 242
                     G PLVATNDV +         +   CI +G  L     + +   E++LKS 
Sbjct: 166  VLAGF----GIPLVATNDVLYHTPARRPLADVLTCIRQGTTLAAAGWALSAHGERHLKSP 221

Query: 243  EEMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGLEE 302
             EMA LF+  PEAL N +E+ +RC   +    +  PN  +  GM   E    ++  G   
Sbjct: 222  AEMARLFAACPEALANGLEVVRRCRFSLDELAYEYPN-EVAAGMDPQERLEILTRQGAAR 280

Query: 303  RLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPVGP 362
            R     P+      +A+       L  EL +I Q+GF  YFL V   + +A++ G+ +  
Sbjct: 281  RY----PRGVPPKVQAQ-------LAHELALIRQLGFAPYFLTVHAIVAFAESRGI-LCQ 328

Query: 363  GRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYVAE 422
            GRGS A S V Y  ++T +DP + DLLFERF++ ER   PD DVDF  + R+ VI+++ +
Sbjct: 329  GRGSAANSAVCYCLRVTPVDPAQMDLLFERFISAERGEPPDIDVDFEHERREEVIQHIYD 388

Query: 423  KYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQEEI 482
             YGR+      T      ++ IRDV +V G S    + L+K      G       ++   
Sbjct: 389  TYGRHRAGLTATVIHYRTRSAIRDVGKVMGLSEDTVEALAKA---NSGWGRRGIKDEHVR 445

Query: 483  LRDFIKIDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGGGLVTQ 542
                   +   A    +A +L G  R++ +H GG VI+  +L +  PI         V Q
Sbjct: 446  ELGLDPTEPGLARTLSLAEELTGFPRHLSQHVGGFVISKGRLDELVPIENAGMEDRTVIQ 505

Query: 543  FDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLDIAFIPLDDKPTYTLL 602
            +DKDD++A GL+K D L L  L+ I  A   +     +     L +A +P +D  TY +L
Sbjct: 506  WDKDDLDALGLMKVDVLALGMLSCIRKAFDLLRLHHGR----DLCLATLPREDASTYDML 561

Query: 603  QKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGRAE 662
             KA+   VFQ+ESR    ++ +L+P    DL+  VA+ RPGP+Q GMV  ++ R+ G+  
Sbjct: 562  CKADAVGVFQVESRAQMSMLPRLRPRRFYDLVVEVAIVRPGPIQGGMVHPYLRRRQGKET 621

Query: 663  LAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGK-KKPEE 721
            + YP      E L+ VL  T G+ L+QEQ M+IA V AG+T   AD LRRAM   +   +
Sbjct: 622  VDYPS-----EELRQVLGKTLGVPLFQEQAMKIAMVAAGFTASEADGLRRAMATFRHTGQ 676

Query: 722  MAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHYP 781
            +       I G      + D A  +F  +E F  YGF +SH+AA+  + Y +AWLK HYP
Sbjct: 677  VGAYGDKLIGGMVARGYERDFAERVFKQIEGFGEYGFPESHAAAFAHLVYVSAWLKCHYP 736

Query: 782  APFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDEGRII-YGLGAI 840
            A F  A+L++          ++ +     + +   DVN S++  T+  EG+ +  GL  +
Sbjct: 737  AAFACALLNSQPMGFYAPAQIVRDAADHGVEIRPVDVNHSDWDCTL--EGKALRLGLRQV 794

Query: 841  KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEP 900
             G+     E +  AR  G       + +   L R +      L R  A D  G       
Sbjct: 795  SGLARRDGERLAAARGAG-------YASAYGLWRTSGLERAALDRLAAADAFG------- 840

Query: 901  KAYQANIDRNRAVLLTAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYGNHRKAKE 960
                  + R  A        AIKA        D+    LF       +A V         
Sbjct: 841  ---SMGLGRREAAW------AIKAL-------DAPPLPLFEEAPPPPEAKV-----ALPP 879

Query: 961  LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQ-TVAGMIIALRV 1019
             ++ E + G+   L L L  HP+       R         LK  +  +  V+G+++    
Sbjct: 880  ASVGEEVVGDYAALKLSLKCHPLAVLRDPFRVLGIMTNASLKDRKGGRVAVSGLVL---- 935

Query: 1020 MKNKKGDKMG--FITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDD 1072
            ++ + G   G  FITL+D +G     ++ D F + +  +    ++ V+G V ++D
Sbjct: 936  VRQRPGSANGVLFITLEDETGIANIVVWPDMFETFRRPILGGHLLRVDGRVQSED 990