Pairwise Alignments

Query, 1173 a.a., DNA polymerase III subunit alpha from Pseudomonas simiae WCS417

Subject, 1154 a.a., DNA polymerase III subunit alpha from Magnetospirillum magneticum AMB-1

 Score =  798 bits (2062), Expect = 0.0
 Identities = 462/1147 (40%), Positives = 678/1147 (59%), Gaps = 78/1147 (6%)

Query: 3    ASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAGIK 62
            A FVHLR+HT YSL +G +++K L+K      MPAV +TD  N+   ++F  +   AGI+
Sbjct: 5    ADFVHLRVHTAYSLAEGAIKLKQLIKLCEKAAMPAVGITDTANLFGALEFSTSCSDAGIQ 64

Query: 63   PICGADLWLSNKD-----------PDNPLSRISLLAMNGVGYRNLTELISRGFIDGQRNG 111
            PI GA + +  +D           PD     + LL  N  GY NL +L+S+ F++     
Sbjct: 65   PIVGAQIAIRREDGGPSKDGRKPEPDT----LVLLCQNEAGYLNLLKLVSKAFLETDAGE 120

Query: 112  SIIIEREWVAEASEGLIMLSAAKEGEIGIALLGGNPQEAEVLAKEWMQVFPDRFYLEVQR 171
            +  +    +   S+GLI+L+    G +G  L  G  ++AE++     + F  R Y+E+ R
Sbjct: 121  TPQVTLHDLETRSDGLIVLTGGPAGPVGRLLADGQTEKAEIVLARLARAFAGRCYVELMR 180

Query: 172  TNRPNDEEHLHAAVALADKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSK 231
             N   ++      V+LA K   PLVATN+  F  +  +EAH+  VCI EG  +    R +
Sbjct: 181  HNLEVEDRIEPLLVSLAYKHDLPLVATNEAFFADRGMYEAHDALVCIAEGAYISQDER-R 239

Query: 232  NYSEEQYLKSAEEMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEY 291
              + E Y KS EEM  LF+DLPEA +N++ IA+RC   V   K  LP + + DG+T  E 
Sbjct: 240  RLTPEHYFKSPEEMRALFADLPEACDNTLVIARRCAFGVAKRKPILPPYRM-DGLTEAEV 298

Query: 292  FRKVSFDGLEERLSVLLPKD--TTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDF 349
             RK +++GLE RL   + K+  T ++ E   + Y +R+ FEL++I +MGFPGYFLIV DF
Sbjct: 299  LRKKTWEGLEARLEKHVFKEGMTDDEKEHAAKPYRERIEFELNVIEEMGFPGYFLIVSDF 358

Query: 350  IQWAKNNGVPVGPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFC 409
            IQW+K   +PVGPGRGSGAGS VA+   ITDLDPL + LLFERFLNPERVSMPDFD+DFC
Sbjct: 359  IQWSKAQEIPVGPGRGSGAGSAVAWALTITDLDPLRWGLLFERFLNPERVSMPDFDIDFC 418

Query: 410  MDGRDRVIEYVAEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEV 469
             D R+  I YV  KYG + V+QIITFG + A+AV+RDV RV    YG  DR+ K++P   
Sbjct: 419  QDRREETIRYVQGKYGYSQVAQIITFGKLQARAVLRDVGRVLQMPYGQVDRICKLVPNNP 478

Query: 470  G--MTLEKAYEQEEILRDFIKIDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDF 527
               MTLE+A E E +L++  + DE  + + D+A KLEG+ R+   HA GVVI    L + 
Sbjct: 479  ANPMTLEQALESEPLLKEQKERDEAVSHLIDLAMKLEGLYRHASTHAAGVVIGDRPLDEL 538

Query: 528  SPIYCDEEGGGLVTQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLD 587
             P+Y D      VTQF+   VE+AGLVKFDFLGL+TLT++  A+K +     K     +D
Sbjct: 539  VPLYRDPRSDMPVTQFNMKWVESAGLVKFDFLGLKTLTVMVTAVKHVK----KTKGIDID 594

Query: 588  IAFIPLDDKPTYTLLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQS 647
            ++ IPLDD  +Y LL + +   VFQLES GM+++++K+ P+ LEDLIA+VAL+RPGP+  
Sbjct: 595  LSAIPLDDAKSYELLSRGDAAGVFQLESSGMRDVLRKMGPNRLEDLIAVVALYRPGPMD- 653

Query: 648  GMVDDFINRKHGRAELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGA 707
              +  +I  KHG+ E      DY +  L+P+L  T+GI++YQEQVMQIAQV++GY+LGGA
Sbjct: 654  -QIPRYIACKHGKEE-----PDYMHPLLEPILKETFGIMVYQEQVMQIAQVLSGYSLGGA 707

Query: 708  DMLRRAMGKKKPEEMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYG 767
            D+LRRAMGKK  EEM +QR  F+EG     +D   A  IFD V KFA YGFNKSH+AAY 
Sbjct: 708  DLLRRAMGKKDREEMDRQRAKFVEGATARAVDGGQASMIFDKVAKFAEYGFNKSHAAAYA 767

Query: 768  LVSYQTAWLKAHYPAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTV 827
            L++YQTAWLKA+YPA FMAA ++ +M NTDK+ +  +E+  + ++L  PD+NAS+  F+V
Sbjct: 768  LIAYQTAWLKANYPAEFMAATMTYEMSNTDKLNSFRQELDRLGIKLLPPDINASQPTFSV 827

Query: 828  N---DEGRII-YGLGAIKGVGEGPVEAITEARQ-DGPFKDLFDFCARVDLKRINKRTLDG 882
                D G  + Y L A+K VGE  ++++ + R+  G FKD+ DF AR+D K +N+R L+ 
Sbjct: 828  EVLPDGGSAVRYALAALKNVGEAAMKSLVDERERGGRFKDVGDFAARMDSKVLNRRQLEN 887

Query: 883  LIRSGALDRLGPYFHDEPKAYQANIDRNRAVLLTAMEEAIKAAEQTARTHDSGHADLFGG 942
            ++++G  D               ++D+NR  L    +   + A   A   DS    L GG
Sbjct: 888  MVKAGVFD---------------SLDKNRGRLFKNADTLCRYAASAAEDRDSSQMSLLGG 932

Query: 943  -----LFVEEDADVYGNHRKAKELTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQR 997
                 L +E   D +  H         E+L  E + +G YL+ HP+D Y   ++R    +
Sbjct: 933  SNAPTLKLESGPD-WSPH---------EKLNQEFEAVGFYLSAHPLDAYAKSMKRLNVLK 982

Query: 998  IIDL-----KPARDTQTVAGMIIALRVMKNKKGDKMGFITLDDRSGRIEASLFADAFHSA 1052
            I +L        +    +AG +++ +   + KG +  F+   D SG  E + F++   ++
Sbjct: 983  IAELPRHLQSGGKGRVRLAGSLLSKQERVSAKGSRYAFLQFSDASGMFEVTCFSEILATS 1042

Query: 1053 QSLLQTDAMVVVEGEVSNDDFSGGLRLRIKRVMSMEDARTNLAESLRLKVKTEALKGDQL 1112
            + LL     ++++ +   ++    LR+  +R+ S++      A  +R+ +  ++     +
Sbjct: 1043 RELLDAGGPLLIDVDAKLEE--DQLRMTCQRIASLDQEAAKAAAGIRVIISDDS----AI 1096

Query: 1113 RWLGELL 1119
            R L +L+
Sbjct: 1097 RQLADLI 1103