Pairwise Alignments

Query, 1173 a.a., DNA polymerase III subunit alpha from Pseudomonas simiae WCS417

Subject, 1002 a.a., translesion DNA polymerase (imuC-like) (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  224 bits (572), Expect = 2e-62
 Identities = 204/712 (28%), Positives = 321/712 (45%), Gaps = 80/712 (11%)

Query: 187 LADKLGAPLVATND-------VRFIKKEDFEAHETRVCIGEGRALDDPRRSKNYSEEQYL 239
           L   L +P +A  D       V F  ++ F  H    CI     L     S+  +     
Sbjct: 135 LKKALRSPWIAEKDRWILLQSVTFHSQQSFNIHRLLRCIELNILLSKLPTSEQGNLSDRF 194

Query: 240 KSAEEMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDG 299
            S  E+AE  +     L+ +  +  RC  E           P+ +        +K  +  
Sbjct: 195 YSTLELAERCAPHYWLLQQTHALLSRCRFEQDYQ-------PVAN--------KKSVYGS 239

Query: 300 LEERLSVLLPKDTTEDYEAKRQVY--------VDRLNFELDIIIQMGFPGYFLIVMDFIQ 351
            +E L+ L    T   Y+  +  Y          R+  ELDII Q  F  YFLI  + ++
Sbjct: 240 EQEDLAQL----TALTYQGAKNRYGTPLSERQETRILKELDIIRQKDFVSYFLINYEIVK 295

Query: 352 WAKNNGVPVGPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMD 411
           +A+  G     GRGSGA S+VAY   ITD+DP+E DL FERF+N  R + PDFD+DF   
Sbjct: 296 FARERGFYY-VGRGSGANSIVAYCLNITDVDPIELDLYFERFINLYRSTPPDFDIDFSWR 354

Query: 412 GRDRVIEYVAEKYG---RNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFE 468
            RD VI+++  K+       V  + T  +    + IR++    GK +GL          +
Sbjct: 355 DRDEVIQHIFHKHNTEDHEHVCLLATHNTFQINSSIREL----GKVFGLPKT-------D 403

Query: 469 VGMTLEKAYEQEEILRDFIKIDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKL---- 524
           +   +    +    + D I      A +   ++ + G+  ++  HAGG++I+   +    
Sbjct: 404 IEALINHVVKPGNYIPDRI-----GALVLKYSQLIHGMPSHLSIHAGGILISQQPIHYYT 458

Query: 525 -TDFSPIYCDEEGGGLVTQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNE 583
            TD  P       G  ++ FD    E  G  KFD L  R L  I  +L+ I +++ K   
Sbjct: 459 ATDLPP------KGFPISHFDMVTAEEIGFAKFDILSQRGLGHIRDSLEIIEKNQGK--- 509

Query: 584 EPLDIAFIP--LDDKPTYTLLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFR 641
             +DI  I     D+     L+K  T   F +ES  M+ L+ KL+ D    L+A  ++ R
Sbjct: 510 -KVDIHRIKDFKHDEKIKQHLRKGHTIGAFYVESPAMRMLLAKLEVDEYLGLVAASSIIR 568

Query: 642 PGPLQSGMVDDFINRKHGRAELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAG 701
           PG  +SGM+ ++I R H + E+        +  L  ++  TYGI++YQE V+++A   AG
Sbjct: 569 PGVARSGMMREYILR-HRKPEM---RKSRAHPILHDLMPETYGIMVYQEDVIKVAHYFAG 624

Query: 702 YTLGGADMLRRAMGKKKPEEMA--KQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFN 759
            +   AD+LRR M  K     A  K +  F +          +   I+  VE FAGY F 
Sbjct: 625 LSFDEADVLRRGMSGKFRSRAAFLKVKESFFKKSMEKGHAPKITSEIWFQVESFAGYSFA 684

Query: 760 KSHSAAYGLVSYQTAWLKAHYPAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVN 819
           K HSA++ + SYQ+ +LKAH+P  FM  V++ +     K    I E++     +  P +N
Sbjct: 685 KGHSASFAVESYQSLYLKAHFPLEFMVGVIN-NFGGFYKTEFYIRELQGYHADVQLPHLN 743

Query: 820 ASEFKFTVNDEGRIIYGLGAIKGVGEGPVEAITEARQ-DGPFKDLFDFCARV 870
            S++  TV     +  G   +K + +     I + R+ +GPF  L DF  R+
Sbjct: 744 ESDY-LTVIKGTTVYLGFIHLKYLQKDITNTILQNRETEGPFTGLRDFINRI 794