Pairwise Alignments

Query, 366 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 362 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  170 bits (431), Expect = 5e-47
 Identities = 109/344 (31%), Positives = 175/344 (50%), Gaps = 2/344 (0%)

Query: 12  VSLVFLLAGCGHEEAAQTTIRPAMVVQPQPSS-QSMDSYPGEVRARYEPDLAFRIGGKVS 70
           + L+++L GC  EE  +T  R   V Q QP+   +  +  G+V+AR + DL+FR+GGK+ 
Sbjct: 12  LGLLYMLTGCSKEEVPETLPRVG-VQQVQPTDFAARVTLTGDVQARVQTDLSFRVGGKII 70

Query: 71  KRLVEEGERVKANQALAELDPQDVRLQLEATRAQVAGAEANLSLVRAERDRYKTLMDRQM 130
            R V+ G+ VKANQ LA LDP+D++  +++ +A+V  A+A ++   A   R + L+ +  
Sbjct: 71  SRSVDVGDHVKANQVLARLDPKDLQNNVDSAKAEVFAAQARVTQTSAAFVRQQKLLPKGY 130

Query: 131 VSRSQYDNSENLYRAGVARLKQIKAEFDVASNQAGYAVLRAPQDGVVAKRVVEVGQVVSA 190
            S+S+YD +E   R+  + LK  +A+   A+ Q  Y  L +   GV+ +R  EVGQVV A
Sbjct: 131 TSQSEYDAAEAALRSNQSALKAAQAQLANANEQLSYTALVSEAAGVITERQAEVGQVVQA 190

Query: 191 GQTVFTLATDGEREVLISLPEQGFGRFKIGQPVSVELWSQPDQRFTGRIRELSPAADPKS 250
              +F+LA DG+R+ + ++ E           V V L   P  +  G +RE++P    +S
Sbjct: 191 TMPIFSLAVDGDRDAVFNVYESLLVAPPSDAGVVVSLLDDPKVQAHGFVREITPTVSAQS 250

Query: 251 RTFAARVAFTGGKVPAELGQSARVFIQVDGDIPLSVPLSALSAENGASYVWRVQPDNTLK 310
            T   +V         +LG          G   + +P SAL+       VW V   + ++
Sbjct: 251 GTVQVKVGLKDVPPGMQLGAPVTATTNAQGRPSIELPWSALTKALHEPAVWVVGEGDKVE 310

Query: 311 RTPVRIGAFGEKTVPVLEGLSPTDWVIAAGVHVLHEGQQVRPVD 354
              V I  +    + V  GL   + V+  G  +LH G QV  VD
Sbjct: 311 LRKVEIRRYLTGKIVVASGLKGGETVVVNGGQLLHPGMQVLKVD 354