Pairwise Alignments

Query, 366 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

 Score =  536 bits (1380), Expect = e-157
 Identities = 273/361 (75%), Positives = 305/361 (84%)

Query: 6   LPFALPVSLVFLLAGCGHEEAAQTTIRPAMVVQPQPSSQSMDSYPGEVRARYEPDLAFRI 65
           L  ALP +   LLA CG E A     RPA+VVQPQP+  + DSYPGEVRAR+EP+LAFRI
Sbjct: 6   LSIALPAAAALLLAACGQEAAPPAAPRPALVVQPQPAEAAADSYPGEVRARFEPELAFRI 65

Query: 66  GGKVSKRLVEEGERVKANQALAELDPQDVRLQLEATRAQVAGAEANLSLVRAERDRYKTL 125
           GGKVSKRLVEEG+RVKA+Q LAELDPQDVRLQLEA RAQ+A AEANL+LVRAERDRY+ L
Sbjct: 66  GGKVSKRLVEEGQRVKADQPLAELDPQDVRLQLEANRAQLAAAEANLALVRAERDRYQKL 125

Query: 126 MDRQMVSRSQYDNSENLYRAGVARLKQIKAEFDVASNQAGYAVLRAPQDGVVAKRVVEVG 185
           ++RQMVS SQYDN+ENLYRAG+ARLKQ KAEFDVA NQA YAVLRAPQ GV+AKR VEVG
Sbjct: 126 LERQMVSHSQYDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAGVIAKRQVEVG 185

Query: 186 QVVSAGQTVFTLATDGEREVLISLPEQGFGRFKIGQPVSVELWSQPDQRFTGRIRELSPA 245
           QVV+AGQTVFTLA DGEREV I LPEQ F RF +GQPVSVELWS P  RF GRIRELSPA
Sbjct: 186 QVVAAGQTVFTLAADGEREVAIGLPEQQFARFAVGQPVSVELWSHPQARFQGRIRELSPA 245

Query: 246 ADPKSRTFAARVAFTGGKVPAELGQSARVFIQVDGDIPLSVPLSALSAENGASYVWRVQP 305
           ADP+SRTFAAR+AFT   VPAELGQSARVFI  DG IPL+VPLSA++AENG +YVWRV  
Sbjct: 246 ADPRSRTFAARIAFTTAAVPAELGQSARVFIAKDGLIPLAVPLSAVTAENGQAYVWRVNK 305

Query: 306 DNTLKRTPVRIGAFGEKTVPVLEGLSPTDWVIAAGVHVLHEGQQVRPVDRSNRVVNLAAK 365
           ++ L+R  VR+GA+G  +VPVLEGL P DWV+AAG HVL EGQ+VRPVDRSNRVVNL AK
Sbjct: 306 ESRLERATVRLGAYGSDSVPVLEGLDPGDWVVAAGGHVLREGQEVRPVDRSNRVVNLTAK 365

Query: 366 E 366
           E
Sbjct: 366 E 366