Pairwise Alignments
Query, 1125 a.a., peptide transporter from Pseudomonas simiae WCS417
Subject, 4679 a.a., peptide synthase from Pseudomonas simiae WCS417
Score = 251 bits (641), Expect = 1e-69
Identities = 188/564 (33%), Positives = 281/564 (49%), Gaps = 41/564 (7%)
Query: 181 DRPALHIGASEVTYRQLHAQALAIQQRLHPLLVTGQTPAV-VGICLEKTIGLYASILAVL 239
D AL ++Y +L+ +A + H L+ G P V V + +E+++ + +LA L
Sbjct: 3052 DALALQFKGQALSYGELNRRA---NRLAHRLIAAGVGPDVLVAVHVERSLDMVIGLLATL 3108
Query: 240 GSGAVYLPLNPDQPPHCHRAMLESAGAQVLLDAGQ------HPLRACFSSLDVSGHAL-H 292
+G Y+PL+P P MLE + A+VLL HP ++ +A+ H
Sbjct: 3109 KAGGAYVPLDPQFPADRLAFMLEDSRARVLLTQSHLDGSLAHPQGVQVLMVEADDNAVEH 3168
Query: 293 DVDLTQPLARLHRHADAPCLMLFTSGTTGQPKGVLLSQANLAHFTAWFRSCVNLDEQSRV 352
D + L +++TSG+TG PKGV++ L FT +++ +RV
Sbjct: 3169 DPQVNVTPEHL-------AYVIYTSGSTGTPKGVMVRHEALCSFTCGMAGTLDIGADARV 3221
Query: 353 LQFSPLSFDSSLIDIFPALVAGAQLIVPSTEQRQDPQQLLDLLHRQRITHAFLPPALLSI 412
L + SFD ++++ L GA +++ E DP+ ++DL+H Q P+ +
Sbjct: 3222 LSLTTFSFDIFALELYVPLTVGATVLLSGQELALDPEAIIDLVHSQCANVLQATPSTWRM 3281
Query: 413 L---PLDQPLGLTHLLTGGDVCEPHVIER-LSAQCQFHNLYGPTEATV-LVTHRMLRPND 467
L P Q L L GG+ + +R L Q NLYGPTE T+ HR+ ++
Sbjct: 3282 LLESPRAQLLRGIKCLCGGEALPSDLAQRLLDLQGPLWNLYGPTETTIWSAAHRL---HE 3338
Query: 468 SNRNVGRPIANSQVLILDEHLQPVDEGVMGEVYIVGPGVSLGYVNALSQASSSFV--ELA 525
+ VGRPIAN+ + IL+ L P G GE+ I G G++ GY + + FV
Sbjct: 3339 AQPLVGRPIANTALFILNAGLTPSPVGAAGELLIGGVGLARGYHERPALTAERFVPNPYG 3398
Query: 526 VPSELPLRAYRTGDLAQWTADGIV-LGGRRDDQVKIRGFRVEPLEIEQCLRSSRLYRQVA 584
P E R YRTGDLA++ ADG+V GR D QVK+RGFR+E E+E CLR R+
Sbjct: 3399 APGE---RLYRTGDLARYRADGVVEYIGRVDHQVKVRGFRIELGEVEACLREQAGIREAV 3455
Query: 585 VVIDRDRRIRGFV--AQPEPGASMTALQHHARQWLPDYMQPGVWDELPRIPCSSNGKIDR 642
V+ D DR I V A P AL R+ LPDYM P L +P + NGK+DR
Sbjct: 3456 VLADNDRLIAYLVSSAPDAPEVYKAAL----RERLPDYMVPAHLMFLDSLPLTPNGKLDR 3511
Query: 643 AALLAVPIQPTLPTACSAAQTPLQTQLTHLWIELLALPTGELSIDESFFDLGGHSILLST 702
AL AV L T A TP + Q+ +W ++L LP ++ +D+ FF+LGGHS+L +
Sbjct: 3512 KALPAVD-AALLRTGHVAPVTPREQQVAAIWADVLDLP--QVGLDDHFFELGGHSLLATR 3568
Query: 703 LLLRFREQFGRSFSLNHFIEAPTI 726
++ R R+ +L E P +
Sbjct: 3569 VVSRVRQALALEVALKTLFEHPLL 3592
Score = 250 bits (638), Expect = 2e-69
Identities = 199/628 (31%), Positives = 313/628 (49%), Gaps = 56/628 (8%)
Query: 140 LDALEALAFTHRFNRSADPDVIEAARVPLI-NRLQASFHTFADRPALHIGASEVTYRQLH 198
L A E H +N++A+ E L+ +++QA+ D PAL G + +TY QL
Sbjct: 488 LAADEQQLLVHAWNQTAEAYPTERGIHHLVEDQVQAT----PDAPALVFGTTTLTYAQLD 543
Query: 199 AQALAIQQRLHPLLVTGQTPAV-VGICLEKTIGLYASILAVLGSGAVYLPLNPDQPPHCH 257
A+A Q H L G P V VGIC+E++I + +LA+L +G Y+PL+P+ P
Sbjct: 544 ARA---NQLAHALREKGVAPDVLVGICIERSIEMVVGLLAILKAGGAYVPLDPEYPQERL 600
Query: 258 RAMLESAGAQVLLDAGQHPLRACFSSLDVSGHALHDVDLTQPL----------ARLHRHA 307
M+E +G Q+LL QH L L V G + + L QP A + HA
Sbjct: 601 AYMIEDSGIQLLLS--QHSL---LPVLPVEG--IQVIALDQPASWLDGYSAESANVSLHA 653
Query: 308 DAPCLMLFTSGTTGQPKGVLLSQANLAHFTAWFRSCVNLDEQSRVLQFSPLSFDSSLIDI 367
+++TSG+TG+PKG S L + W + LD + VLQ +P SFD S+ +
Sbjct: 654 LNLAYVIYTSGSTGKPKGAGNSHRALVNRLCWMQQAYGLDARDAVLQKTPFSFDVSVWEF 713
Query: 368 FPALVAGAQLIVPSTEQRQDPQQLLDLLHRQRITHAFLPPALLSILPLDQP-----LGLT 422
F L+ GA+L+V + + ++P +L++ + R IT P++L + +P L
Sbjct: 714 FWPLMTGARLVVAAPGEHREPARLIETIGRHGITTLHFVPSMLQAF-IHEPGVQACTSLQ 772
Query: 423 HLLTGGDV----CEPHVIERLSAQCQFHNLYGPTEATVLVTH-RMLRPNDSNRNVGRPIA 477
++ G+ + V +L Q NLYGPTEA + VTH + + +GRPIA
Sbjct: 773 RIVCSGEALPLDAQLQVFAKL-PQAGLFNLYGPTEAAIDVTHWTCVDEGADSVPIGRPIA 831
Query: 478 NSQVLILDEHLQPVDEGVMGEVYIVGPGVSLGYVNALSQASSSFVELAVPSELPLRAYRT 537
N +LD L PV GV GE+Y+ G G++ Y + + FV P R YRT
Sbjct: 832 NLGTYVLDAQLNPVPAGVSGELYLGGIGLARSYHRRPALTAERFV--PSPFGDGARLYRT 889
Query: 538 GDLAQWTADGIV-LGGRRDDQVKIRGFRVEPLEIEQCLRSSRLYRQVAVVIDRDRRIRGF 596
GD + ADG++ GR D QVK+RG R+E EIE L R+ V++ +++ +
Sbjct: 890 GDRVRQRADGVIEYLGRLDHQVKLRGLRIELGEIETRLMQHPSVREAVVLVQGGKQLVAY 949
Query: 597 VAQPEPGASMTALQHHARQWLPDYMQPGVWDELPRIPCSSNGKIDRAALLAVPIQPTLPT 656
+ + + L+ LP+YM P L ++P ++NGK+DR AL + P
Sbjct: 950 LVLED--TAPVDLKAWLLSSLPEYMVPSHMVPLAKLPVTANGKLDRKALPLPDVAP--QQ 1005
Query: 657 ACSAAQTPLQTQLTHLWIELLALPTGELSIDESFFDLGGHSILLSTLLLRFREQFGRSFS 716
A A + LQ + +W ++L + ++ +D++FF+LGG SI+ ++ R R Q G S
Sbjct: 1006 AFVAPENDLQKAVAAIWSDVLGVE--QVGLDDNFFELGGDSIISIQVVSRAR-QAGIRLS 1062
Query: 717 LNHFIEAPTIRTL--------ATLVEQG 736
+ ++R+L AT ++QG
Sbjct: 1063 PRDLFQYQSVRSLALVATFEQATAIDQG 1090
Score = 211 bits (538), Expect = 8e-58
Identities = 193/592 (32%), Positives = 277/592 (46%), Gaps = 46/592 (7%)
Query: 171 RLQASFHTFADRPALHIGASEVTYRQL--HAQALAIQQRLHPLLVTGQTPAV-VGICLEK 227
R+ A D A+ G + ++Y QL HA LA H LL G P VG+ +
Sbjct: 1990 RIAAQAAATPDALAVQAGDARLSYAQLNDHANRLA-----HRLLALGVGPGQRVGLAARR 2044
Query: 228 TIGLYASILAVLGSGAVYLPLNPDQPPHCHRAMLESAGAQVLLDA----GQHPLRACFSS 283
L S+LAVL SGA Y+PL+P+ P ML + +LL PL +
Sbjct: 2045 GPQLIVSLLAVLKSGAAYVPLDPNYPTERLAYMLADSRLDLLLSETGLLADLPLPQGLAR 2104
Query: 284 LD--VSGHALHDVDLTQPLARLHRHADAPCLMLFTSGTTGQPKGVLLSQANLAHFTAWFR 341
LD SG L D T P H A +++TSG+TG PKGV + A L+ F
Sbjct: 2105 LDFTASGAELADYPSTPPAN--HAAAADLAYVIYTSGSTGLPKGVAIDHAALSQFCDSAE 2162
Query: 342 SCVNLDEQSRVLQFSPLSFDSSLIDIFPALVAGAQLIVPSTEQRQDPQQLLDLLHRQRIT 401
+ L RVLQF+ SFD + +P L GA LI+ ++ D QL + Q +T
Sbjct: 2163 AYSRLSASDRVLQFATFSFDGFVEQCYPPLCVGAALIMRG-DELWDAGQLAREIVEQGVT 2221
Query: 402 HAFLPPALLSILPLD-----QPLG-LTHLLTGGDVCEPHVIERLSA-------QCQFHNL 448
A LP A +L + + LG L + GG+ +E L A + N
Sbjct: 2222 LADLPAAYWYLLAKECAVDRRTLGNLRQVHVGGEAMS---VEGLRAWHTAGLGGVRLVNT 2278
Query: 449 YGPTEATVLVTHRMLRPNDSNR----NVGRPIANSQVLILDEHLQPVDEGVMGEVYI-VG 503
YGPTEATV+ + + D++ +GR I + +LD + + +GE+ I
Sbjct: 2279 YGPTEATVVSSVHDCQLADASDAFGVPIGRAIEGRALYVLDSGFELLASDGVGELCIGAE 2338
Query: 504 PGVSLGYVNALSQASSSFVELAVPSELPLRAYRTGDLAQWT-ADGIVLGGRRDDQVKIRG 562
G++ Y + + + F+ + R YR+GDLA++ A + GR D QVKIRG
Sbjct: 2339 HGLAQCYFDRPALTAERFLPDPFSAVPGARLYRSGDLARYNEAGALEYVGRIDHQVKIRG 2398
Query: 563 FRVEPLEIEQCLRSSRLYRQVAVVIDRDRRIRGFVAQPEPGASMT----ALQHHARQWLP 618
FRVE EIE L++ R+ AV+ VA P + T AL RQ LP
Sbjct: 2399 FRVEMGEIEASLQALPSLREAAVIAQPSATGTQLVAYVVPVTAQTLDPQALAATLRQSLP 2458
Query: 619 DYMQPGVWDELPRIPCSSNGKIDRAALLAVPIQPTLPTACSAAQTPLQTQLTHLWIELLA 678
DYM PG W L +P ++NGK+DR AL A P A A Q PLQ++L +W +L
Sbjct: 2459 DYMVPGQWVILEALPLNNNGKLDRRALPA-PDLNQARQAYLAPQNPLQSRLAAIWQAVLQ 2517
Query: 679 LPTGELSIDESFFDLGGHSILLSTLLLRFREQFGRSFSLNHFIEAPTIRTLA 730
+ ++ +++ FF+ GGHS+L + ++ R R L E PT+ A
Sbjct: 2518 VE--QVGLNDHFFERGGHSLLATQVVSRVRHDLKLEVPLRALFEQPTLEAFA 2567
Score = 170 bits (431), Expect = 2e-45
Identities = 166/575 (28%), Positives = 247/575 (42%), Gaps = 39/575 (6%)
Query: 181 DRPALHIGASEVTYRQLHAQALAIQQRLHPLLVTGQTPAV-VGICLEKTIGLYASILAVL 239
D A+ A ++Y +L QA + H L+ G P V V I + ++ + + LAV+
Sbjct: 4086 DAVAVKFDAQTLSYGELDRQA---NRLAHALIARGVGPDVRVAIAMPRSAEIMVAFLAVM 4142
Query: 240 GSGAVYLPLNPDQPPHCHRAMLESAGAQVLLD----AGQHPLRACFSSLDVSG-HALHDV 294
+G VY+PL+ + P M++ + AQ+LL Q P+ SL +
Sbjct: 4143 KAGGVYVPLDIEYPRDRLLYMMQDSRAQLLLTHTRALQQLPIPDGLDSLAIDRTEEWAGF 4202
Query: 295 DLTQPLARLHRHADAPCLMLFTSGTTGQPKGVLLSQANLAHFTAWFRSCVNLDEQSRVLQ 354
T P +L D +++TSG+TG PKGV +S L L
Sbjct: 4203 SDTAPQVKLG--GDNLAYVIYTSGSTGMPKGVAVSHGPLVAHIIATGERYETSPADCELH 4260
Query: 355 FSPLSFDSSLIDIFPALVAGAQLIVPSTEQRQDPQQLLDLLHRQRITHAFLPPALLSILP 414
F +FD S L+ GA +++ + P+ +HR +T A PP L L
Sbjct: 4261 FMSFAFDGSHEGWMHPLINGASVLIRD-DSLWLPEYTYQQMHRHHVTMAVFPPVYLQQLA 4319
Query: 415 LD-----QPLGLTHLLTGGDVCEPHVIE---RLSAQCQFHNLYGPTEATVLVTHRMLRPN 466
P + GGD + R N YGPTE V R
Sbjct: 4320 EHAERDGNPPKVRVYCFGGDAVAQASYDLAWRALKPTYLFNGYGPTETVVTPLLWKARKG 4379
Query: 467 DSNRNVGRPIA----NSQVLILDEHLQPVDEGVMGEVYIVGPGVSLGYVNALSQASSSFV 522
D V PI N +LD L GV GE+Y+ G GV+ GY+ + + FV
Sbjct: 4380 DPCGAVYAPIGTLLGNRSGYVLDAQLNLQPIGVAGELYLGGEGVARGYLERPALTAERFV 4439
Query: 523 ELAVPSELP-LRAYRTGDLAQWTAD-GIVLGGRRDDQVKIRGFRVEPLEIEQCLRSSRLY 580
P P R YR+GDL + D G+ G QVKIRGFR+E EIE LR
Sbjct: 4440 --PDPFGKPGSRVYRSGDLTRGRPDGGVDYLGSVAHQVKIRGFRIELGEIEARLREQDNV 4497
Query: 581 RQVAVVIDRDRRIRGFVAQPEPGASMTA--------LQHHARQWLPDYMQPGVWDELPRI 632
+ VV + VA P ++ A L+ + LPDYM P + L ++
Sbjct: 4498 GETVVVAHEGPTGKQLVAYVVPADTLLADETEFRDSLRRALKTHLPDYMVPTHFMFLAQM 4557
Query: 633 PCSSNGKIDRAALLAVPIQPTLPTACSAAQTPLQTQLTHLWIELLALPTGELSIDESFFD 692
P + NGK+DR L P L A A +T L+ Q+ +W ++L LP ++ ++++FF+
Sbjct: 4558 PLTPNGKLDRKG-LPEPDASLLQQAYVAPETELEQQIAAIWADVLRLP--QVGLNDNFFE 4614
Query: 693 LGGHSILLSTLLLRFREQFGRSFSLNHFIEAPTIR 727
+GGHS+L + R + + G L + T+R
Sbjct: 4615 VGGHSLLAIQITSRVQAELGLEVPLLEVFQTETLR 4649