Pairwise Alignments

Query, 261 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 257 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  237 bits (604), Expect = 2e-67
 Identities = 128/257 (49%), Positives = 172/257 (66%), Gaps = 2/257 (0%)

Query: 1   MRKQLMIPALLAMSVALAACSTPP-NANLENARTNFSSLQTNPQATKLAALETKDASEWL 59
           MR    IP L A+S+  A C+TPP N  L  AR+ FSSLQ  P++  LAA+ET+ AS  L
Sbjct: 1   MRALFFIPVLSALSLVFAGCATPPENPQLLQARSLFSSLQEKPESNTLAAVETRIASNAL 60

Query: 60  DKADKAYRDKEDEKKVDQLAYLTNQRVEVAKDTIVLRESEAKLKNAGDERARALLDARDA 119
           D+A++       + ++DQLAYL  Q++ +A+ TIV R+++A+L N   +R +  LD R A
Sbjct: 61  DRANQVSLHDRTDPQIDQLAYLATQKIALAEQTIVGRKTDAQLDNIAVDRTQVQLDVRTA 120

Query: 120 QIKQLQDSLNAKQTDRGTLVTFGDVLFATNKSDLKSSGLVNITKLAQFLRDNPDRKVIVE 179
           Q+K LQ ++ A+ T+RG ++TFGDVLF T K+DLK+    +   LA FL  NP+R+V VE
Sbjct: 121 QLKALQ-AMKAQPTERGQVITFGDVLFDTGKADLKAGSQRDFQGLANFLVQNPERQVRVE 179

Query: 180 GYTDSTGSDSYNQSLSERRAASVQRALAQQGVDISRIVTQGYGKEYPVADNGSVSGRAMN 239
           G+TDS G D+YNQSLSERRA +V R L + GV I RI   GYGK++PVADN S   R +N
Sbjct: 180 GFTDSVGGDAYNQSLSERRAQAVARGLQRLGVGIERIAVIGYGKQFPVADNQSAQSRQLN 239

Query: 240 RRVEVTISNDNQPVKPR 256
           RRVEV +SND   V  R
Sbjct: 240 RRVEVIVSNDASAVSAR 256