Pairwise Alignments

Query, 261 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 270 a.a., OmpA family protein from Pseudomonas putida KT2440

 Score =  146 bits (369), Expect = 4e-40
 Identities = 93/265 (35%), Positives = 138/265 (52%), Gaps = 11/265 (4%)

Query: 2   RKQLMIPALLAMSVALAACSTP-PNANLENARTNFSSLQTNPQATKLAALETKDASEWLD 60
           R  L   ALLA++  L  C++   +A L+ A   F  ++ +    + A  +   A E L 
Sbjct: 4   RTPLAALALLALTAGLQGCASQRSSAALDEATVAFQGVKDDSDVLRSAPRDVIRAGESLA 63

Query: 61  KADKAYRDKEDEKKVDQLAYLTNQRVEVAKDTIVLRESEAKLKNAGDERARALLDARDAQ 120
           +A++          V   AYL+ +  E+A++   L  ++ +      ER R  L  R+A+
Sbjct: 64  RAERLSSYIGTGSDVRHYAYLSQRYSEIAREHAKLALNQERQAKLDLERQRLQLALREAK 123

Query: 121 IKQLQD----------SLNAKQTDRGTLVTFGDVLFATNKSDLKSSGLVNITKLAQFLRD 170
           +  +Q           +L ++Q DRG ++T GDVLF T  +DLK+S    + KL QFL+ 
Sbjct: 124 LASVQQQGKWVESQIAALASEQADRGLVMTLGDVLFDTGSADLKNSASRTVLKLVQFLQL 183

Query: 171 NPDRKVIVEGYTDSTGSDSYNQSLSERRAASVQRALAQQGVDISRIVTQGYGKEYPVADN 230
           NP R V +EGYTDSTG+   N  LS  RA SV   L   G+D  R+  +GYG +YP+  N
Sbjct: 184 NPRRVVRIEGYTDSTGAGEENLKLSRDRAQSVADMLVDLGIDEKRLQVEGYGDQYPIEAN 243

Query: 231 GSVSGRAMNRRVEVTISNDNQPVKP 255
            S  GRA NRRVE+  S+D   + P
Sbjct: 244 ASERGRAQNRRVEIVFSDDKGRLAP 268