Pairwise Alignments

Query, 261 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 263 a.a., OmpA family protein from Pseudomonas putida KT2440

 Score =  390 bits (1002), Expect = e-113
 Identities = 201/257 (78%), Positives = 228/257 (88%)

Query: 1   MRKQLMIPALLAMSVALAACSTPPNANLENARTNFSSLQTNPQATKLAALETKDASEWLD 60
           MRK +MIPALLA+SV LAACS  PNANLE+ARTNFSSLQ++PQA+K+AALETKDA +WL+
Sbjct: 1   MRKHVMIPALLALSVGLAACSHDPNANLESARTNFSSLQSDPQASKVAALETKDAQDWLN 60

Query: 61  KADKAYRDKEDEKKVDQLAYLTNQRVEVAKDTIVLRESEAKLKNAGDERARALLDARDAQ 120
           KADKAY D+EDEKKVDQLAYLTNQRVEVAK TI LR +EA+LKNA  +RA+A LDARDAQ
Sbjct: 61  KADKAYMDREDEKKVDQLAYLTNQRVEVAKQTIALRTAEAELKNASAQRAQAKLDARDAQ 120

Query: 121 IKQLQDSLNAKQTDRGTLVTFGDVLFATNKSDLKSSGLVNITKLAQFLRDNPDRKVIVEG 180
           I +LQDSLNAKQTDRGTLVTFGDVLF  NK++LKS+   NITKLAQFL++NP+RKVIVEG
Sbjct: 121 IAKLQDSLNAKQTDRGTLVTFGDVLFDFNKAELKSNAYPNITKLAQFLQENPERKVIVEG 180

Query: 181 YTDSTGSDSYNQSLSERRAASVQRALAQQGVDISRIVTQGYGKEYPVADNGSVSGRAMNR 240
           YTDS GS +YNQ+LSERRA SV+ AL + GVD +RIV+QGYGKEYPVADN S SGRA NR
Sbjct: 181 YTDSVGSANYNQTLSERRANSVRMALVRAGVDPARIVSQGYGKEYPVADNSSNSGRAQNR 240

Query: 241 RVEVTISNDNQPVKPRS 257
           RVEVTISNDNQPV PRS
Sbjct: 241 RVEVTISNDNQPVAPRS 257