Pairwise Alignments

Query, 499 a.a., lysyl-tRNA synthetase from Pseudomonas simiae WCS417

Subject, 505 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  595 bits (1535), Expect = e-175
 Identities = 306/503 (60%), Positives = 378/503 (75%), Gaps = 6/503 (1%)

Query: 1   MSDQQLDQALQQEE-NSLIALRKEKLAAERAKGNAFPNDFRRENYCDALQKQYADKTKEE 59
           MS+Q    A +  + N+ +  R+EKLAA R +G  FPNDFRR+   D L  ++  K  EE
Sbjct: 1   MSEQNAQGADEVVDLNNEMKARREKLAALREQGIPFPNDFRRDRTSDQLHAEFDAKEAEE 60

Query: 60  LAEAAIPVKVAGRIMLNR----GSFMVIQDMTGRIQVYVNRKTLPEETL-ASVKTWDMGD 114
           L    I V VAGR+M  R     SF+ +QD+ GRIQ+YV R  LPE       K WD+GD
Sbjct: 61  LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD 120

Query: 115 IIAAEGTLARSGKGDLYVEMTHVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEV 174
           I+ A+G L ++  G+L +  T +RLLTK+LRPLPDK HGL D E RYRQRY+DLI N+E 
Sbjct: 121 ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES 180

Query: 175 RHTFRVRSQVIAHIRTFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAP 234
           R+TF+ RS+++A IR F++ R F+EVETPM+Q IPGGA+A+PF THHNALD++M+LRIAP
Sbjct: 181 RNTFKTRSKILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP 240

Query: 235 ELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRE 294
           ELYLKRLVVGGFE+VFEINRNFRNEG+S RHNPEFTM+E Y AYADY+D ++LTE LFR 
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT 300

Query: 295 LAQLVLGSTDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAGA 354
           LAQ VLG+T VPYGD+VF FG+PF +L++ ++I KY PE    DL++ D A+AIA+  G 
Sbjct: 301 LAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI 360

Query: 355 KVLGFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRNDDNPNVTDRFELFIGG 414
            V    GLG++   IF+E+ E  L QP FIT+YP EVSPLARRND NP +TDRFE FIGG
Sbjct: 361 HVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420

Query: 415 REIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGID 474
           REI N +SELNDAEDQA+RF+ QV  K AGDDEAM YD D+V ALE+G+PPTAG GIGID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 475 RLVMLLTNSPSIRDVILFPHMRP 497
           R+VML TNS +IRDVILFP MRP
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMRP 503