Pairwise Alignments

Query, 333 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 496 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  146 bits (369), Expect = 9e-40
 Identities = 83/169 (49%), Positives = 107/169 (63%), Gaps = 9/169 (5%)

Query: 164 LQRLMNSDGLTGLSNRRHFDEYLELEWRRAMRDQTQLSLLMIDVDFFKTYNDSFGHVEGD 223
           L  L ++D LTGL+NRR  D  L  EW RA R +  L++LM+DVD FK +N   GH  GD
Sbjct: 330 LAMLASTDSLTGLANRRRLDHVLRQEWARAQRSRKPLAILMVDVDHFKAFNQRHGHAGGD 389

Query: 224 EALRKVAAAIREASSRPSDLPARYGGEEFALVLPNTSPGGARLVAEKLRMAVAALKIPHN 283
            ALR+VA AI     RP+DL ARYGGEEF +VLP T   GA+L+AE++R  V AL     
Sbjct: 390 HALREVAKAIEACIRRPADLAARYGGEEFQVVLPETDLAGAQLLAERIRANVEAL----- 444

Query: 284 AP--TEGSSLTISIGLSTLTPVQGTDCRQLIMAADKGLYTAKHNGRNQV 330
           AP   +  ++T+SIG+      Q  D  +L+ AAD+ LY AK NGRN+V
Sbjct: 445 APFADDAHAVTVSIGIGLSGTQQ--DLGRLLGAADEALYRAKANGRNRV 491