Pairwise Alignments

Query, 383 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 365 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 85/324 (26%), Positives = 148/324 (45%), Gaps = 36/324 (11%)

Query: 9   LSALTTALLASASLQAAEPLKAVGAGEGQLDIVAWPGYIERGESDKAYDWVTGFEKETGC 68
           ++ +   LLA+A + A     AV A +  L++  W  YI       A D +  FEK+TG 
Sbjct: 1   MNKMGKTLLAAALMGAMA--SAVQAEDKVLNVYNWSDYI-------APDTIAKFEKQTGI 51

Query: 69  KVNVKTAATSDEMVS--LMAKGGYDLVTASGDASLRLIVGKRVQPINTALIPNWKNIDPR 126
           KV      +++ + +  L  K GYD+V  S +   + I     + ++ + +PNWKN+DP 
Sbjct: 52  KVKYDVFDSNETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYEELDRSKLPNWKNLDPD 111

Query: 127 LKDAPWYVVGQQT-YGTPYQWGPNVLMYNTNVFKTAP-----TSWNVIFDPQNLPDGKPN 180
           L  A      +   +  PY WG   + YN    K A       SW+V+F P+N+   K  
Sbjct: 112 LLKAVGDASDKDNKHAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVVFKPENI--AKLK 169

Query: 181 KGRVQAYDGPIYIADAALYLKSTKPELGIQNPYELTETQ-YKAVLELLRAQQPLIHRYWH 239
              V   D P  +  AAL+         +  P + T+ +  KA  +L    +P I  Y+H
Sbjct: 170 SCGVSFLDAPTEMLPAALHY--------LGKPTDSTKKEDLKAAEDLFLKIRPSI-TYFH 220

Query: 240 DTTVQMSDFKNEGVVASSAWPYQVNGLQ------NEKQPIASTIPKEGATGWADTTMLHT 293
            +   + D  N  +  +  +   +   +       +K  +   IPKEGA  + D   +  
Sbjct: 221 SSKY-IGDMANGNICVAVGYSGDLEQSKARAHEAGDKVKVDYVIPKEGAGTFYDMVAIPK 279

Query: 294 EAKHPNCAYKWMDWSLQPKVQGDV 317
           +A+H + AY++M++ +QP++  ++
Sbjct: 280 DAEHKDAAYEFMNFLMQPEIMAEI 303