Pairwise Alignments

Query, 383 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 381 a.a., predicted spermidine/putrescine transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  609 bits (1570), Expect = e-179
 Identities = 285/379 (75%), Positives = 319/379 (84%)

Query: 5   KTALLSALTTALLASASLQAAEPLKAVGAGEGQLDIVAWPGYIERGESDKAYDWVTGFEK 64
           KT   S+L    +   +  AAEP   +   EG+LDI+AWPGYIERG++DK YDWVT FEK
Sbjct: 3   KTFARSSLCALSMTIMTAHAAEPPTNLDKPEGRLDIIAWPGYIERGQTDKQYDWVTQFEK 62

Query: 65  ETGCKVNVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIVGKRVQPINTALIPNWKNID 124
           ETGC VNVKTAATSDEMVSLM KGGYDLVTASGDASLRLI+GKRVQPINTALIPNWK +D
Sbjct: 63  ETGCAVNVKTAATSDEMVSLMTKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKTLD 122

Query: 125 PRLKDAPWYVVGQQTYGTPYQWGPNVLMYNTNVFKTAPTSWNVIFDPQNLPDGKPNKGRV 184
           PR+    W+ VG + YGTPYQWGPN+LMYNT  F T P SW V+F  QNLPDGK NKGRV
Sbjct: 123 PRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVEQNLPDGKSNKGRV 182

Query: 185 QAYDGPIYIADAALYLKSTKPELGIQNPYELTETQYKAVLELLRAQQPLIHRYWHDTTVQ 244
           QAYDGPIYIADAAL++K+T+P+LGI +PY+LTE QY+AVL++LRAQ  LIHRYWHDTTVQ
Sbjct: 183 QAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRAQHSLIHRYWHDTTVQ 242

Query: 245 MSDFKNEGVVASSAWPYQVNGLQNEKQPIASTIPKEGATGWADTTMLHTEAKHPNCAYKW 304
           MSDFKNEGVVASSAWPYQ N L+ E QP+A+  PKEG TGWADTTMLH+EAKHP CAYKW
Sbjct: 243 MSDFKNEGVVASSAWPYQANALKAEGQPVATVFPKEGVTGWADTTMLHSEAKHPVCAYKW 302

Query: 305 MDWSLQPKVQGDVAAWFGSLPAVPAACKESELLGAEGCKTNGFDQFEKIAFWKTPQAEGG 364
           M+WSL PKVQGDVAAWFGSLP VP  CK S LLG +GC+TNGF+ F+KIAFWKTP AEGG
Sbjct: 303 MNWSLTPKVQGDVAAWFGSLPVVPEGCKASPLLGEKGCETNGFNYFDKIAFWKTPIAEGG 362

Query: 365 KFVPYSRWTQDYIAIMGGR 383
           KFVPYSRWTQDYIAIMGGR
Sbjct: 363 KFVPYSRWTQDYIAIMGGR 381