Pairwise Alignments

Query, 236 a.a., RNA-binding protein S4 from Pseudomonas simiae WCS417

Subject, 236 a.a., S4 domain protein from Pseudomonas putida KT2440

 Score =  272 bits (696), Expect = 4e-78
 Identities = 131/236 (55%), Positives = 173/236 (73%)

Query: 1   MTDPIRLSKRLIELVGCSRREAELFIEGGWVSVDGEVIDEPQFKVTTQKVALDPDAKATV 60
           M++P+RLSKRLIE +GCSRREAE +IEGGWV+VDG V+++PQFKV  Q+V L P A+A  
Sbjct: 1   MSEPVRLSKRLIEQLGCSRREAEQYIEGGWVTVDGVVVEQPQFKVEQQRVELLPGARAET 60

Query: 61  PEPVTILLHAPAGVDAETAMASISAETLSEEHRFGKRPLKGHFLRLTASADLQAKASGLL 120
            EPVT+LL+ PAG+D+E A AS++  +LSE HR G R L GHF R    A L+  ASGL 
Sbjct: 61  LEPVTLLLNQPAGMDSEDARASMNMGSLSEAHREGVRALHGHFARQACVAPLERGASGLQ 120

Query: 121 VFTQDWKILRKLTADAAKIEQEYVVEVEGDMVAHGLNRLNHGLTYKGKELPAVKASWQNE 180
           VFTQDW++ RK+ AD  ++EQE+++EV G+     L RL  G     +ELP  KASWQNE
Sbjct: 121 VFTQDWRVSRKIEADLRRLEQEFIIEVRGETTPQALERLARGAMRNDRELPKAKASWQNE 180

Query: 181 NRLRFAMKNPQPGVIALFCEAVGLKVIAIRRIRIGGVSIGKVPVGQWRYLSGKEKF 236
             LR  +KNPQPG I+  C  + L+++ +RRIR+GGVS+GK+P+GQWRYL+  E+F
Sbjct: 181 THLRMVLKNPQPGQISELCAYLRLELLGMRRIRLGGVSMGKLPLGQWRYLATSERF 236