Pairwise Alignments

Query, 236 a.a., RNA-binding protein S4 from Pseudomonas simiae WCS417

Subject, 235 a.a., pseudouridine synthase from Enterobacter asburiae PDN3

 Score = 47.0 bits (110), Expect = 3e-10
 Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 26/241 (10%)

Query: 5   IRLSKRLIELVGCSRREAELFIEGGWVSVDGEVIDEPQFKV-TTQKVALDPDAKATVPEP 63
           +RL K + + +G SR  A   I    V+VDG+++ +  FK+    +V  D +       P
Sbjct: 1   MRLDKFIAQQLGVSRAIAGREIRASRVTVDGDIVKDTAFKLQPDHQVEYDGNPLTQQHGP 60

Query: 64  VTILLHAPAGVDAETAMASISAETLSEEHRFGKRPLKGHFL------RLTASADLQAKAS 117
              +L+ P G    T            +H     P   +FL      +L A+  L    +
Sbjct: 61  RYFMLNKPEGYVCSTD---------DPDH-----PTVLYFLDEPVAHKLHAAGRLDIDTT 106

Query: 118 GLLVFTQDWKILRKLTADAAKIEQEYVVEVEGDMVAHGLNRLNHGL-TYKGKEL--PAVK 174
           GL++ T D +   ++T+     E+ Y+V +E  +      +   G+  +  K+L  PAV 
Sbjct: 107 GLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVSDDTAEQFTKGVQLHNEKDLTKPAV- 165

Query: 175 ASWQNENRLRFAMKNPQPGVIALFCEAVGLKVIAIRRIRIGGVSIG-KVPVGQWRYLSGK 233
                   +R  +   +   +     AVG +V+ + R RIG + +   +  G++R L+ +
Sbjct: 166 LEVITPTEVRLTISEGRYHQVKRMFAAVGNRVVGLHRERIGAIELDPDLAPGEYRPLTEE 225

Query: 234 E 234
           E
Sbjct: 226 E 226