Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 324 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  114 bits (286), Expect = 2e-30
 Identities = 83/293 (28%), Positives = 136/293 (46%), Gaps = 3/293 (1%)

Query: 1   MRFTLRQLQVFVAVAQQESVSRAAGLLALSQSAASTSITELERQSSCQLFDRAGKRLSLN 60
           MR TLRQLQ+F  V    S SRAA  ++L+Q A S  I +LE      LFD  GK+L + 
Sbjct: 6   MRMTLRQLQIFNEVCDLRSYSRAAEEMSLTQPAVSLQIRQLEELIGQPLFDYVGKKLYMT 65

Query: 61  ALGHQLLPQAVALLDQAKEIEDLLNGKSGF--GSLAVGATLTIGNYLATLLIGSFMQQHP 118
                L   +  +  + + ++  L+   G   G L + A  +   Y    L  +F +QHP
Sbjct: 66  EAAEALQRASRDIFGRLENLDMQLSDMQGSLQGQLKL-AIESSAKYFVPHLFAAFKRQHP 124

Query: 119 ESQVKLHVQNTAHIVHQVAHYEIDLGLIEGDCSHPDIEVQTWVEDELVVFCAPQHHLAKR 178
           E Q+ L V N A ++ +++    DL ++        +E   ++ + +V      H L+ +
Sbjct: 125 EVQLHLTVVNRAQVIRRLSDNRDDLVIMSMVPQDMGLEFLPFLNNPIVAVAPHDHPLSLQ 184

Query: 179 GVASMDELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIG 238
           G   + +L     +LRE GSGTRL  ++  +  R      +E+   EA +  V +GLG+ 
Sbjct: 185 GPLRLQDLEPYTLLLREPGSGTRLACEEYFKEKRVHFTQTVEVASAEAQRECVCAGLGVA 244

Query: 239 CISRLALRDAFRRGSLVPVETPDLDLARQFYFIWHKQKYQTSAMREFLELCRA 291
            ++R A+      G L  +   +L L R +  +  K K  +     FL   R+
Sbjct: 245 LLTRHAVNMELATGGLKELPVEELPLYRSWCLVQAKAKRLSPVAHAFLGFIRS 297