Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 294 a.a., putative LysR-type transcriptional activator protein from Pseudomonas putida KT2440

 Score =  211 bits (537), Expect = 2e-59
 Identities = 118/291 (40%), Positives = 166/291 (57%), Gaps = 2/291 (0%)

Query: 2   RRKIPSTTALVSFEAAARHESFTKAAHELSITQGAICRQIASLEEFLSVELFRRSRRGVK 61
           R   PS + L++FEAAARHES+T+AA ELS+TQ A+ RQ+ +LE+ L + LFRR  R V+
Sbjct: 4   RHLTPSMSLLLAFEAAARHESYTRAAAELSLTQSAVSRQVQALEQQLGLTLFRREGRQVQ 63

Query: 62  LTEAGLSYSRRVATQLDAVERDTLSVMG-QQGANTIELAVVPTFGTQWLIPRLKDFQRKH 120
           LT+ G  Y R ++  L  +   TL  +  Q G  T+ LA +PTFG++WL+PRL  F   H
Sbjct: 64  LTDVGRLYQRELSEALGRIRSATLQALAYQSGVGTLRLATLPTFGSKWLLPRLHAFYSAH 123

Query: 121 PEVTVNLTNRTRPFLFADTEFDAAIYFGDADWSGTESHRLMGENPVPVCSPRLLANTTQF 180
           P + V++ +R     F  +E DAAI     D  G   HRL  E  V +  P     +  +
Sbjct: 124 PGMLVHIHSRIETINFDTSEIDAAIGVASHDLPGLVCHRLHAEELVVILPPEAGVGSQGW 183

Query: 181 SPQEIAELPLLQQTTRPYAWRQWFNAQQLNIPRDMTGPRYELFSMLSQAAMHDMGIALIP 240
           SP  I+E  LL     P+AW +WF+   L       GP +EL S L QA    +GI L+P
Sbjct: 184 SPARISEEVLLNVANNPHAWGEWFSHHGLPHRAMRLGPSFELTSHLIQAVRAGIGIGLVP 243

Query: 241 PFLIQRELEEGQLVIASPEALSSSKAYYLMIPDRKVESASLHAFRDWLIDQ 291
             L++ EL +G+L  +   A +S ++YYL+ P R     SL AFR WL++Q
Sbjct: 244 RILVEEELAKGEL-YSPGVAFASQRSYYLIYPPRNEALPSLRAFRGWLLEQ 293