Pairwise Alignments

Query, 302 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 257 a.a., cell envelope biogenesis protein OmpA from Pseudomonas simiae WCS417

 Score = 59.7 bits (143), Expect = 7e-14
 Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 37/254 (14%)

Query: 40  CRLTQPITDFGSGEFVRRAGEQATFRLKAYNGSLGAGSATLLAAAAPWQP-GRGDINLGA 98
           C    P      G+    +G  +     A  G LGA +  L  AA      G+G + +GA
Sbjct: 20  CASPNPYDGSSQGQASNESGGMSK---TAKYGGLGALAGALAGAAIDHNNRGKGAL-IGA 75

Query: 99  VRAGSGDVLFNSSQAQAGRLFNGLLEGRSPTVRHYGREGGYSEIRLLPVKFNKAYNDYQL 158
           V AG+G   +     Q  +    L E  + T     R+G   ++ ++P     A N   +
Sbjct: 76  VVAGAGAAGYGYYADQQEKK---LRESMANTGVEVQRQGDQIKL-IMPGNITFATNSDAI 131

Query: 159 CTAKLLPMNYDQVKQTEVGFPGGGIELDAAAKKKLDVILAFMKADPTVNHIELNGHSDNS 218
            ++  LP+N                             LA        N I++ G++D++
Sbjct: 132 SSSFYLPLNN----------------------------LANSLKQFNQNTIQIVGYTDST 163

Query: 219 GNRLTNRDVSRRRGLAVMDYFKANGIPESQITLRFHGESYPLAPNTNAANRARNRRVNIQ 278
           G+R  N D+S+RR  +V +Y  + G+  + ++ R  G   P+A N +   RA+NRRV + 
Sbjct: 164 GSRQLNMDLSQRRAQSVANYLTSQGVNGANLSARGAGPDNPIASNADVNGRAQNRRVEVN 223

Query: 279 LERVAAPEKPAPQA 292
           L  +   +   P A
Sbjct: 224 LGPIPGQQYGQPGA 237