Pairwise Alignments

Query, 302 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 317 a.a., Outer membrane protein, OmpA family from Pseudomonas putida KT2440

 Score =  442 bits (1136), Expect = e-129
 Identities = 218/289 (75%), Positives = 249/289 (86%), Gaps = 1/289 (0%)

Query: 1   MRQQYLALLSVFASLPAMALTFQTRLENIEWKVEGDQFECRLTQPITDFGSGEFVRRAGE 60
           +RQ+YLALL++FASLPA ALTFQTR+ENI WKVEGDQFECRL+QPI  FGSG FVRRAGE
Sbjct: 5   VRQRYLALLTLFASLPAGALTFQTRMENIAWKVEGDQFECRLSQPIEGFGSGTFVRRAGE 64

Query: 61  QATFRLKAYNGSLGAGSATLLAAAAPWQPGRGDINLGAVRAGSGDVLFNSSQAQAGRLFN 120
           Q  F+L++ + +LGAG+A+LLAAAAPWQPGRGDINLG VR     VLF+SSQ QA RL N
Sbjct: 65  QPVFQLRSDSNALGAGTASLLAAAAPWQPGRGDINLGNVRMARSGVLFSSSQGQASRLIN 124

Query: 121 GLLEGRSPTVRHY-GREGGYSEIRLLPVKFNKAYNDYQLCTAKLLPMNYDQVKQTEVGFP 179
           GLL+GRS  VR+Y G  G   E+R+LPV F KAYNDYQ+C  KLLPMNYDQV+QT+VGFP
Sbjct: 125 GLLDGRSTVVRNYTGEAGRPMEVRVLPVSFAKAYNDYQVCAGKLLPMNYDQVRQTQVGFP 184

Query: 180 GGGIELDAAAKKKLDVILAFMKADPTVNHIELNGHSDNSGNRLTNRDVSRRRGLAVMDYF 239
           GGGIELDAAAK +LDVIL +MKADPTVNH+ELNGHSDNSGNRLTNRD+SRRR LAV DYF
Sbjct: 185 GGGIELDAAAKARLDVILDYMKADPTVNHVELNGHSDNSGNRLTNRDLSRRRALAVADYF 244

Query: 240 KANGIPESQITLRFHGESYPLAPNTNAANRARNRRVNIQLERVAAPEKP 288
           KANG+PE QIT+RFHGE YPLA N +A+NRARNRRVNI+L+RVA  EKP
Sbjct: 245 KANGVPEEQITVRFHGERYPLAKNNSASNRARNRRVNIELDRVAVVEKP 293