Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  118 bits (295), Expect = 1e-31
 Identities = 76/213 (35%), Positives = 112/213 (52%), Gaps = 12/213 (5%)

Query: 10  PAIPGLWNGMVMTLQLMVMGVVGGIALGTVLALMRLSSSKLLSRVAGAYVNYFRSIPLLL 69
           P + GLW     TL L V+  + G+ +G    L RLSS+  L  ++  YV   R  PLL+
Sbjct: 116 PLMWGLWT----TLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLV 171

Query: 70  VITWFYLAVPFVLRWITGEDTPIGAFTSCVVAFMMFEAAYFCEIVRAGVQSIPKGQMAAA 129
            I  FY  +  VL         +    + + A  +F  AY  EIVRAGVQSI +GQ  AA
Sbjct: 172 QIFIFYFFIGTVLN--------LSREFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAA 223

Query: 130 QAMGMTYGQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDII 189
           +++G++  Q+MR ++LPQAF+++ P L  Q I L +DTSLV  + + + L S R      
Sbjct: 224 RSLGLSASQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTS 283

Query: 190 GRSNEFLIFAGVVYFIISFSASLLVKRLQKRFA 222
               E L     +Y +I+   S +  RL++R A
Sbjct: 284 FSPFEILFCVAGLYLLINLPLSKMASRLERRLA 316