Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 222 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  213 bits (542), Expect = 2e-60
 Identities = 115/223 (51%), Positives = 147/223 (65%), Gaps = 6/223 (2%)

Query: 1   MDFDFSGIIPAIPGLWNGMVMTLQLMVMGVVGGIALGTVLALMRLSSSKLLSRVAGAYVN 60
           +DF F         +  G   ++ L V+  +GGI  GT+LALMRLS  K L   A AYVN
Sbjct: 4   LDFSFYNWSLVSTYVLKGFYFSVILTVVATLGGIFFGTLLALMRLSGKKWLDFPAAAYVN 63

Query: 61  YFRSIPLLLVITWFYLAVPFVLRWITGEDTPIGAFTSCVVAFMMFEAAYFCEIVRAGVQS 120
             RS+PL++VI  F+L VPFV+        PIGA TS V+ F+ FEAAYF EI+RAG+QS
Sbjct: 64  GMRSVPLVMVILGFFLLVPFVI------GHPIGAETSAVITFICFEAAYFSEIMRAGIQS 117

Query: 121 IPKGQMAAAQAMGMTYGQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLN 180
           IP+GQ+ A QA+GMTY Q M+L+ILPQAFR M P+LL Q+IILFQDTSLVY +G  D L 
Sbjct: 118 IPRGQVFAGQAVGMTYSQNMKLVILPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLK 177

Query: 181 SARSNGDIIGRSNEFLIFAGVVYFIISFSASLLVKRLQKRFAV 223
              + G   GR  E  + A VVYF++ ++ S LVKRL K+ A+
Sbjct: 178 GFETAGKNFGRPEEAYLLAAVVYFVLCYALSWLVKRLHKKIAI 220