Pairwise Alignments

Query, 465 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 461 a.a., fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) from Escherichia coli BW25113

 Score =  372 bits (956), Expect = e-107
 Identities = 199/456 (43%), Positives = 285/456 (62%), Gaps = 4/456 (0%)

Query: 3   HNILVVDDEPKLCDLLASALGQNDVQVFIAGNGLHALKVLEQEDIDLVISDWRMPGMDGP 62
           + IL+VDDE  +  +L++A      +   A NG  AL +      D+V+ D RMP MDG 
Sbjct: 5   NRILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPEMDGI 64

Query: 63  ALLAEIKVRYPHVPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVAKALQFRD 122
             L E++      PVI+MTAY+ V+ AV+++R GA+DY+ KPFD+DEL++ V +ALQ + 
Sbjct: 65  KALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQLQS 124

Query: 123 IMRDNARLRAELDEHAQFDSLVGDSPAFRKVLQAVDSVRDSSATILLTGESGTGKEMVAR 182
           + ++   L   L    Q+  ++ +SPA   + +    +  S A++L++GESGTGKE++AR
Sbjct: 125 MKKEIRHLHQALSTSWQWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGKELIAR 184

Query: 183 AIHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTLFLD 242
           AIH +  RA  PF+ VNCAA+PE LLESE+FGH KGAFTGA   R G F++A++GTL LD
Sbjct: 185 AIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLD 244

Query: 243 EVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLDAVANKEFREDLYY 302
           E+G+MPL LQAK+LR LQER  E +G  +  KVD+R+IAATN++L   V    FREDL+Y
Sbjct: 245 EIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFY 304

Query: 303 RLNVFPIPLPSLRERVEDIAPLARHFAQTLSATAGKRITGFSAEALQAMAAYHWPGNIRE 362
           RLNV  + LP LR+R EDI+ LA HF Q  S+   + I      A+  + A+ WPGNIRE
Sbjct: 305 RLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNIRE 364

Query: 363 LQNCVERATIVAASPVIEDIDLPGYLFASKPNQGDVTAILSDGPGIPQDLDAALAEVEKA 422
           L N +ERA ++ + P+I   DLP  +     N G+V       P   ++L   +  VEK 
Sbjct: 365 LSNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGEV----KTAPVGERNLKEEIKRVEKR 420

Query: 423 YILAALQESNGVQAAAAAKIGISERSFWYRLKKLGI 458
            I+  L++  G +   A  +GIS R+  Y+L++ GI
Sbjct: 421 IIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGI 456