Pairwise Alignments

Query, 589 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 655 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  105 bits (261), Expect = 8e-27
 Identities = 81/256 (31%), Positives = 122/256 (47%), Gaps = 20/256 (7%)

Query: 337 LSSTFNHMTERLGELHHLEAQLRRRDRLHALGEVAMGLAHEIRNPLGIIKT-ATQLLHRR 395
           L  T     E L   H  + +L+   RL  +GE+A  LAHE+  PL  I + AT  L+R 
Sbjct: 401 LDITERKRAEELSRQH--QEKLQHTARLITMGEMASTLAHELNQPLSAIASYATGCLNR- 457

Query: 396 ADLADTDKRHLEYVI------SEVSRINDLITEFLDFAKPNPPLRVLLPARPLVEEILGF 449
             L+  D R  E V       ++  R   +I    DF + + PL V      ++E ++GF
Sbjct: 458 --LSAGDARPEELVPPLTKLGAQAQRAGQIIRRIHDFVRKSEPLVVPCLLDEIIEGVVGF 515

Query: 450 CAPELATHTIDAQID-DQAPGAT---IYADAKQLKQACLNLILNAIDAMPEGGR----LT 501
             P+     I   +D    PGA    + AD   ++Q  LNL+ NA++AM    R    LT
Sbjct: 516 LEPDARKRGIRIDLDLSLTPGAARPRVEADHILIEQVILNLVRNAMEAMGHTPRPQRRLT 575

Query: 502 LGIRADGENTVISIADTGQGIPADMIERIFTPFVTTKASGTGLGLAKVYSIMESHDGSIE 561
           + ++       I +AD G GIP ++   +F+PF TTK +G G+GL    SI+E+H G + 
Sbjct: 576 ISLQCADGQARIRVADRGTGIPPEIAANLFSPFFTTKETGMGMGLNICRSIVEAHRGHLW 635

Query: 562 CASEKDAGATFSLYIP 577
                  G+ F   +P
Sbjct: 636 FEENPGGGSVFLFTLP 651