Pairwise Alignments

Query, 605 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 768 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 66.2 bits (160), Expect = 5e-15
 Identities = 113/481 (23%), Positives = 197/481 (40%), Gaps = 75/481 (15%)

Query: 141 TAEDDIQAQFNRLDAEGRLQLQDVATDTYDLLLSSLEFAQVTSDDRAADILVGLGKLAIN 200
           T + D +A+++  D  GRL       D ++ +L  L+   +  ++ AA       +  + 
Sbjct: 330 TNDYDRRAKWDSGDEIGRL------VDAFNTMLERLQAEGLRREELAAQTRAAEAQRDL- 382

Query: 201 KEQLPSEFQGPVDILSNHISLILREQPVVNDLLERIATVPVAEHLDALTTHLDQDQQAAD 260
            E +P+     V  LS+H SL+   QP    LL     + + +  DA+  HL  + +   
Sbjct: 383 LEAIPTPLT--VSRLSDH-SLLHVNQPA--SLL-----LGLLDSYDAVEDHLSAEDRERL 432

Query: 261 LIDHQYHRYLLIFSTLLVG-------------LLLYLAVRLLRSFAEINRVNRALHAANE 307
                 H  +  F   ++G             LL+Y   + L   A I  ++      +E
Sbjct: 433 FQQLSLHGAVNEFEVQVMGAGDVPFWALMSARLLVYQGEKAL--LATIIPISERKRMEDE 490

Query: 308 TLEQR--VERRTRQLKDAQSELLDSARQAGMAEIATNVLHNVGNVLNSVNISAELVTRKL 365
            L  +   E     L+ AQ  L+ + + A +  +   V H +   +      A  +  + 
Sbjct: 491 LLRAKNAAEAALSDLQQAQQSLIQAEKMASLGGLVAGVAHEINTPVGIGLTGASTLASET 550

Query: 366 RSSKALGLGKAMQLINEHKADLGTFL-TEDEKGKLLPGYLNQLVDAIAVEQQGMTDELAQ 424
              + L   +AM      + D   +L    E  +LL   +N+  + I   +Q   D+ + 
Sbjct: 551 ERLRKLYGEQAMT-----EEDFLDYLGVAAETARLLLANMNRAAELIHSFKQVAVDQTSA 605

Query: 425 LSKSVD---HIKDIVSTQQSYAGAATLLEPVHISGLMEDALRMNAGALSRHHVTVVKEYA 481
             +  D   +I++I+++         L   V +S    D + MN+               
Sbjct: 606 ERRRFDLKTYIEEILNSLTPTIKKRRL--GVEVS--CPDGIEMNS--------------- 646

Query: 482 QVPEILADKHRLLLIMVNLISNAKYAMSNLSDRPRQMTLKVQPLEDNTLQISVKDDGEGI 541
             P IL+       ++ NL+ NA    +   ++   + ++VQ L D  L ++  DDG+GI
Sbjct: 647 -YPGILSQ------VLTNLVMNA-VVHAYEENQAGILGIRVQDLGDEVL-LAFSDDGKGI 697

Query: 542 PAENMTRIFTHGFTTRK--EGHGFGLHSC-ALAAVEMNGQLSAHSDGPGLGAVFTLTIPM 598
            AEN++RIF   FTTR+   G G GLH    +    +NGQ+   S+ PG G  FTL  P 
Sbjct: 698 SAENLSRIFDPFFTTRRGNGGSGLGLHIVFNVVTGSLNGQIDVASE-PGRGTTFTLRFPK 756

Query: 599 T 599
           T
Sbjct: 757 T 757