Pairwise Alignments

Query, 605 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 645 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 66.2 bits (160), Expect = 4e-15
 Identities = 79/309 (25%), Positives = 126/309 (40%), Gaps = 42/309 (13%)

Query: 309 LEQRVERRTRQLKDAQSELLDSARQAGMAEIATNVLHN-------VGNVLNSVNISAELV 361
           LE+ VE RT  LK AQ E L ++R A + ++A  + H        VG+ L  +  +AE V
Sbjct: 359 LERLVEERTEALKQAQIEALQASRMASVGQLAAGIAHEINTPIQYVGDNLAFIQSAAEAV 418

Query: 362 TRKLRSSKALG---------LGKAMQLINEHKADLGTFLTEDEKGKLLPGYLNQLVDAIA 412
              L  ++AL           GK  + +  + A    FL E+     LP     L     
Sbjct: 419 FPLLSEARALAESWRVGEGDAGKTEEFLQHYDAAGLDFLMEET----LPAVTQSL----- 469

Query: 413 VEQQGMTDELAQLSKSVDHIKDIVSTQQSYAGAATLLEPVHISGLMEDALRMNAGALSRH 472
                  + +AQ+++ V  +K+      S   A      V I+  ++  L +        
Sbjct: 470 -------EGVAQVARIVLSMKEFSHPGTSQKTA------VDINRALDSTLVVCRNTWKHV 516

Query: 473 HVTVVKEYAQVPEILADKHRLLLIMVNLISNAKYAMSNLSDRPRQMTLKVQP-LEDNTLQ 531
                +    +P +      +  + +NLI NA +A+   S +P   T+  +  L  +  +
Sbjct: 517 ARMETRFDPALPLVNCHPGEMNQVFLNLIVNAAHAIEE-SGKPLPGTITAETALCGDWAE 575

Query: 532 ISVKDDGEGIPAENMTRIFTHGFTTRKEGHGF--GLHSCALAAVEMNGQLSAHSDGPGLG 589
           I + D G GI  E    IF   FTT++ G G   GL  C    V  +G        P  G
Sbjct: 576 IRISDSGTGISDEIAQHIFDPFFTTKEVGKGTGQGLAICYDVVVNKHGGQIVVGGEPEHG 635

Query: 590 AVFTLTIPM 598
           A+FT+ IP+
Sbjct: 636 AIFTIRIPV 644