Pairwise Alignments

Query, 382 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 386 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  179 bits (453), Expect = 2e-49
 Identities = 138/383 (36%), Positives = 194/383 (50%), Gaps = 29/383 (7%)

Query: 9   IDFFRGLALIFIFWDHVPHNPLGQITLRNIGFSDAAEVFVFLAGYAAVLAYGKILQRDGY 68
           IDF+RG AL+ IF +H+P +  G  T RN GFSDAAE+FVFLAG +A  AY +       
Sbjct: 11  IDFWRGFALLTIFINHIPGHVFGAFTYRNFGFSDAAELFVFLAGISAAFAYLRPFSAGER 70

Query: 69  WIASLKILRRAWVLYVVHIFLLAMLMGIVFFANSHVETRD--LVEEMGLTHFVTHPQQAL 126
              + ++  RA+ LY  H+ L  ++M +V      V T D  ++E M L     +P ++L
Sbjct: 71  VRTTARVWMRAFTLYAAHLVL--VVMSVVVVGGFVVLTGDERMLEWMHLDIIPQYPLESL 128

Query: 127 TDELLLRFKPNLMDPLPLYIVLLSGLPLVLPLLLRKTWAVVGVSLTVYL--------LAP 178
               LL ++P  ++ LPLY+ LL   P++L L  R     + VSLT+YL        L  
Sbjct: 129 VGIGLLTYQPGYLNILPLYVGLLLLAPILLLLARRSLGLALVVSLTLYLVTQIADLALPV 188

Query: 179 WMGWNLRAIADGVWYFNPVTWQLLFVLGGAAAIHARQPRPVETRGLLRQPLFVAAAAYSV 238
           W G        G W+FNP+ WQLLF  G    I A   R +  R    + L VAA  Y +
Sbjct: 189 WPG-------PGGWFFNPLAWQLLFTCG--LVIGALMDRGL--RSAAHRVLDVAAPLY-L 236

Query: 239 MAGIITISWRWPEAHDAWMPSPLSDLLYPISKTDLSPVRLLHFLALAYVTAKLLPGMGWT 298
           +A ++     +P   D    SP+   L+   KT+L+  RLLH LALAY  ++ LP   W 
Sbjct: 237 LAALVWAVLGYPVTPDL---SPVPPFLWDFDKTNLALPRLLHVLALAYCVSR-LPLEAWL 292

Query: 299 RHWL-AQQSCRMGRYSLEVFCLGVLLAPLADMLNALAGDALAMQLFSATVGVVLMGLLAA 357
           +    A     MGR++L VFCLG +L+  A ++  L   ALA+ L     G  L   LA 
Sbjct: 293 KKSASAAPLILMGRHALPVFCLGTVLSLGAQVVRPLVDGALAVDLLIVAAGFSLQWSLAW 352

Query: 358 WLEFNKRLDKSLQDRRVLAMPSS 380
            LE+  R  K  Q   + A P +
Sbjct: 353 ALEWQARGRKPTQASSLQATPGA 375