Pairwise Alignments

Query, 472 a.a., L-alanine and D-alanine permease (from data) from Pseudomonas simiae WCS417

Subject, 467 a.a., aromatic amino acid transporter from Pseudomonas simiae WCS417

 Score =  399 bits (1024), Expect = e-115
 Identities = 196/446 (43%), Positives = 287/446 (64%), Gaps = 12/446 (2%)

Query: 18  LKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVIMRALGEMA 77
           LKR L  RHI+L+ALG  IG GLFLGSA  ++ AGP+++L Y I G    +IMR LGEM 
Sbjct: 11  LKRGLKNRHIQLIALGGAIGTGLFLGSAGVLKSAGPSMILGYAIAGFIAFLIMRQLGEMI 70

Query: 78  VHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAVYMGVWFPDTPRWIW 137
           V  PVAGSFS +A  Y G  AGFL GWNYW L+++  +AE+TAV  Y+  W+PD P W+ 
Sbjct: 71  VEEPVAGSFSHFAHKYWGGYAGFLAGWNYWVLYVLVGMAELTAVGKYIQFWWPDIPTWVS 130

Query: 138 ALAALISMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGIIAFGFGNDGVALGISN 197
           AL   +++  IN + VK FGE EFWFA+IK+V I+ M++ G  ++  G G  G    +SN
Sbjct: 131 ALVFFVAVNLINTLNVKFFGETEFWFAIIKVVAIVGMIVLGCYLLFSGTG--GPQASVSN 188

Query: 198 LWAHGGFMPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTIPSAIGSVFWRILLF 257
           LW+HGGF PNG  G+LMS+  +MF++ G+E++G+TA EA  P+K IP AI  V +RIL+F
Sbjct: 189 LWSHGGFFPNGGMGLLMSMAFIMFSFGGLELVGITAAEASEPRKVIPKAINQVVYRILIF 248

Query: 258 YVGALFVILSIYPWNEI---------GTQGSPFVMTFERLGIKTAAGIINFVVITAALSS 308
           YVGAL V+LS+YPW+++            GSPFV  F  +G  TAA I+NFVV+TAALS 
Sbjct: 249 YVGALTVLLSLYPWDQLLQTLGASGDAYSGSPFVQIFSLIGNDTAAHILNFVVLTAALSV 308

Query: 309 CNGGIFSTGRMLYSLAQNGQAPATFAKTSSNGVPRKALLLSIFALLLGVLLNYLVPEKVF 368
            N G++   RML+ LA+ G AP +  K +  GVP +AL +S    +L V++NY+ P+   
Sbjct: 309 YNSGVYCNSRMLFGLAEQGDAPKSLMKLNKQGVPIRALAISALVTMLCVVVNYVAPQSAL 368

Query: 369 VWVTSIATFGAIWTWLMILLAQLKFRKSLSPAEQAGLKYRMWLYPVSSYLALAFLLLVVG 428
             + ++     +  W +I +  +KFRK++   +     ++ + +P S+YL LAF+++++ 
Sbjct: 369 ELLFALVVASLMINWALISITHIKFRKAMG-EQGVTPSFKTFWFPFSNYLCLAFMVMIIS 427

Query: 429 LMAYFPDTRIALYVGPVFLVLLTVLF 454
           +M   P    ++Y  PV++ ++ V +
Sbjct: 428 VMLAIPGISESVYAMPVWVGIIYVAY 453