Pairwise Alignments

Query, 472 a.a., L-alanine and D-alanine permease (from data) from Pseudomonas simiae WCS417

Subject, 467 a.a., proline (histidine) APC transporter from Pseudomonas putida KT2440

 Score =  509 bits (1312), Expect = e-149
 Identities = 249/464 (53%), Positives = 336/464 (72%), Gaps = 8/464 (1%)

Query: 11  ETAQGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVIM 70
           + AQG  LKR L  RHIR MALG+ IG GLF GSA AI+MAGPA++L+Y+IGG A+ ++M
Sbjct: 2   QQAQG--LKRGLSARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIGGAAVFMVM 59

Query: 71  RALGEMAVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAVYMGVWFP 130
           RALGEMAVHNPVAGSF  YA  YLGP+AGF+ GW Y F  ++  +A++TA  +YMG WFP
Sbjct: 60  RALGEMAVHNPVAGSFGHYATTYLGPMAGFILGWTYAFEMVIVAIADVTAFGIYMGFWFP 119

Query: 131 DTPRWIWALAALISMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGIIAFGFGNDG 190
           +  RWIW L  +  +G +NL  VK FGE EFW +L+K+  I+AM++ G+GI+AFGF   G
Sbjct: 120 EVARWIWVLGIVFLIGGLNLCNVKVFGEMEFWLSLLKVGAIVAMILAGLGIMAFGFSQVG 179

Query: 191 V--ALGISNLWAHGGFMPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTIPSAIG 248
              A+G+SNL+ HGGFMPNGV G++ S  +VMFA+ G+E+IG+TAGEAK+PQ+ IP AI 
Sbjct: 180 TGHAVGMSNLFDHGGFMPNGVGGLIASFAVVMFAFGGIEIIGVTAGEAKDPQRVIPKAIN 239

Query: 249 SVFWRILLFYVGALFVILSIYPWNEIGTQGSPFVMTFERLGIKTAAGIINFVVITAALSS 308
           +V  RILLFYV  LFV++ +YPW +IG+QGSPFV  F  LGI +AA ++N VVI+AA+S+
Sbjct: 240 AVPLRILLFYVLTLFVLMCLYPWPQIGSQGSPFVQIFSNLGIGSAAAVLNVVVISAAISA 299

Query: 309 CNGGIFSTGRMLYSLAQNGQAPATFAKTSSNGVPRKALLLSIFALLLGVLLNYLVPEKVF 368
            N  IF  GRM+Y LAQ G AP  F+K S +GVP   +++   ALL+GVLLNYL+PE VF
Sbjct: 300 INSDIFGAGRMMYGLAQQGHAPRGFSKLSKHGVPWMTVVVMGAALLIGVLLNYLIPENVF 359

Query: 369 VWVTSIATFGAIWTWLMILLAQLKFRKSLSPAEQAGLKYRMWLYPVSSYLALAFLLLVVG 428
           + + SIATF  +W WLMILL Q+  R+S+S  + A LK+ +  +P    +A+AF++ + G
Sbjct: 360 LLIASIATFATVWVWLMILLTQVAMRRSMSREQVAQLKFPVPFWPYGPAMAIAFMVFIFG 419

Query: 429 LMAYFPDTRIALYVGPVFLVLLTVLFYVFKLQPTQVAQGEARPV 472
           ++ YFPDT+ AL VG +++V L V  Y+   +P     G+ +PV
Sbjct: 420 VLGYFPDTQAALIVGVIWVVFL-VASYLLWCKP---RAGQGQPV 459