Pairwise Alignments

Query, 472 a.a., L-alanine and D-alanine permease (from data) from Pseudomonas simiae WCS417

Subject, 472 a.a., Uncharacterized amino acid permease YtnA from Pseudomonas putida KT2440

 Score =  845 bits (2184), Expect = 0.0
 Identities = 417/467 (89%), Positives = 442/467 (94%), Gaps = 1/467 (0%)

Query: 1   MPVGNHLPHGETAQGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYI 60
           MPVGNH  HG+  +GGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYI
Sbjct: 1   MPVGNHSAHGQATEGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYI 60

Query: 61  IGGLAILVIMRALGEMAVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITA 120
           IGGLAILVIMRALGEMAVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITA
Sbjct: 61  IGGLAILVIMRALGEMAVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITA 120

Query: 121 VAVYMGVWFPDTPRWIWALAALISMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVG 180
           VA+YMG+WFPD PRWIWALAAL SMG++NL+AVKAFGEFEFWFALIKIVTIIAMV+GG+G
Sbjct: 121 VAIYMGIWFPDVPRWIWALAALGSMGAVNLVAVKAFGEFEFWFALIKIVTIIAMVLGGIG 180

Query: 181 IIAFGFGNDGVALGISNLWAHGGFMPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQ 240
           IIAFGFGNDGVA+GISNLW++GGFMPNGV GVLMSLQMVMFAYLGVEMIGLTAGEA+NPQ
Sbjct: 181 IIAFGFGNDGVAVGISNLWSNGGFMPNGVTGVLMSLQMVMFAYLGVEMIGLTAGEARNPQ 240

Query: 241 KTIPSAIGSVFWRILLFYVGALFVILSIYPWNEIGTQGSPFVMTFERLGIKTAAGIINFV 300
           KTIP AIGSVFWRILLFYVGALFVILSIYPWNEIG+QGSPFVMTFERLGIKTAAGIINFV
Sbjct: 241 KTIPQAIGSVFWRILLFYVGALFVILSIYPWNEIGSQGSPFVMTFERLGIKTAAGIINFV 300

Query: 301 VITAALSSCNGGIFSTGRMLYSLAQNGQAPATFAKTSSNGVPRKALLLSIFALLLGVLLN 360
           VITAALSSCNGGIFSTGRMLYSLAQNGQAPA FA+TS NGVPR ALLLSI ALLLGVL N
Sbjct: 301 VITAALSSCNGGIFSTGRMLYSLAQNGQAPAAFARTSKNGVPRNALLLSIGALLLGVLAN 360

Query: 361 YLVPEKVFVWVTSIATFGAIWTWLMILLAQLKFRKSLSPAEQAGLKYRMWLYPVSSYLAL 420
           YLVPEKVFVWVTSIATFGAIWTW+MILLAQLKFR  L+ AE+  LKYRMWL+P+SSYLAL
Sbjct: 361 YLVPEKVFVWVTSIATFGAIWTWVMILLAQLKFRAGLTTAERKALKYRMWLWPLSSYLAL 420

Query: 421 AFLLLVVGLMAYFPDTRIALYVGPVFLVLLTVLFYVFKLQPTQVAQG 467
           AFL+LVVGLMAYF DTR+ALY+GP FLVLLTVL+Y F+L P   AQG
Sbjct: 421 AFLVLVVGLMAYFEDTRVALYIGPAFLVLLTVLYYTFRLAPKD-AQG 466