Pairwise Alignments

Query, 841 a.a., fimbrial assembly protein from Pseudomonas simiae WCS417

Subject, 828 a.a., fimbrial protein from Pseudomonas simiae WCS417

 Score =  254 bits (649), Expect = 1e-71
 Identities = 218/814 (26%), Positives = 374/814 (45%), Gaps = 72/814 (8%)

Query: 4   GDIEFNTDVLDLVDRTNIDLSQFARSGFILPGTYSMVVQINSQPISEQSVAFYPPDDDPK 63
           GD  FNT  L      ++DL     S  +LPG Y + +  N   +  + + F     + +
Sbjct: 26  GDEHFNTSFLQGA-AASVDLQSLLASSSVLPGNYRVDLYGNDTLVGRRDIDFRRNPSNGR 84

Query: 64  GSQACVSRALVEELG-----LKASGAAGLTWWKGGECLDIQGL-PGMEVAGDLATSTLSI 117
             +AC++  +++++G     L+A+G   L       CLD+  L     V  D+    L +
Sbjct: 85  -VEACLTLEMLQQVGVDIGALQANGK--LVDTDPNACLDLPALIEHASVRYDVPRLRLLV 141

Query: 118 NLPQAYLEYSAINWDPPSRWDEGVPGLLVDYNVTA-QASHQKNDSVRHNFSGNGTVGANA 176
           ++PQ  +E     +  P+ WD+GVP   ++Y +++ ++S+  N ++ +N       G N 
Sbjct: 142 SVPQRAMERGRRGYVDPALWDDGVPAAFMNYQLSSNRSSNDANTTLSNNLGLRN--GINL 199

Query: 177 GAWRLRADWQGRVDRDRDQAARHPTLEWSRYYAYRAIPALKARMVLGEDYLYSELFDSFR 236
           G WRLR +             R  T + +R Y    + ALK +   G+ +  ++LFDS R
Sbjct: 200 GGWRLRNE-----SNFSSSTGRSSTFKSNRSYLQHDLTALKGQFSAGDIFSDADLFDSVR 254

Query: 237 FTGAALNSDESQLPPNLRGYAPEVVGVAKTNARVIISQQGRVLYETLVAAGPFRIQDLND 296
           + G  + SD+     + RGYAP + GVA+++A V I Q   +LY   V  GPF I D+  
Sbjct: 255 YRGLKMASDDGMRADSERGYAPIIRGVAQSSATVEIRQNNYILYTANVPPGPFEISDIYP 314

Query: 297 AVS-GRLDVRVEEQDGSVHTFQIDTAGVPYLTRPGQVRYKLASGRPSNLQYGGDGDFFGS 355
           + S G L+V V E DG         + +P + R GQV+Y L++G+ ++   G     F S
Sbjct: 315 SGSNGDLEVTVIEADGRRRVTVQAFSSLPIMVREGQVKYSLSAGQYNSNSDGQKTPQFVS 374

Query: 356 GEFSWGISNGWSLYGGGITDNNYRALSVGAGRDLLAFGAVSLDATQSHASVWNETLSGKS 415
              ++GIS+  S   G     +++ALSVGAGR+  + GAVSLD T S +  +   ++G S
Sbjct: 375 STLAYGISSNLSGIVGVQATQDFQALSVGAGRN-TSIGAVSLDMTHSASRTFGRQVTGNS 433

Query: 416 YRLQYSKKFEEYDSQVTFAGYRFSEKNYLSMSEYLDARHYGRNGELAGLDKESEYSGSWK 475
            R  Y+K F   D+  T A YR+S + Y +++E+++        EL+        S    
Sbjct: 434 LRALYAKTFTGTDTNFTLAAYRYSTEGYRTLTEHVE--------ELS--------SDGRT 477

Query: 476 PIGGSKALYTATLNKQF--RDLGATVYLSYNKQTYWERPATQRWNVSMSRYFNVGSVKNL 533
            +G SK     T+N+         +VYL+ + Q YW R   Q  +   S Y+     +++
Sbjct: 478 HLGNSKTRTDLTVNQSLGRNQQFGSVYLNASDQRYWGRGGAQSLSAGYSNYW-----RDV 532

Query: 534 SVSLNMYRTQEY-NY----KDNGMALTVSLPLG----------RSGTLSLDANRAAGKNS 578
           + +L+   T++  NY     D  + L++S PLG           + T   +     G N 
Sbjct: 533 TYNLSATHTKDVGNYGPSNNDTLINLSLSFPLGSKPRAPRAFVSASTQKDNDTTQMGVNG 592

Query: 579 FSTRYSDRLDERNSYQLSASDNAASGYLSHIG---DQADIDLAASKQQG-DYTSLSVSAR 634
           + T      D    Y L A +++  G           A +D++    QG  Y++ +++  
Sbjct: 593 YLTE-----DSNTYYSLQAGNSSTGGSTGSANLSTRTALMDISGGYSQGRGYSAQNLNV- 646

Query: 635 GGGTLTAHGAALHRTNSTGGTRLMVDTAGVPDVPVRGY-GAPTRSNAFGKAVISDIGSYQ 693
             G++ AH   ++   + G T  +    GVP V +  + GA T SN  G AVI +   Y+
Sbjct: 647 -AGSVVAHAGGINLGQTVGETFALAQVEGVPGVKISSFSGARTGSN--GYAVIPNTQPYR 703

Query: 694 RTAASVDLESLPSNVEATQSVTQLTLTEGAIGYRFLDVISGQKAMAVLRLPDGSSPPFGA 753
               S+D   L +++E   +  Q+    GA+        SG++    L        PFGA
Sbjct: 704 VNWISLDTRDLGADIEIDNATQQVVPRRGAVVLARYASKSGRRVQFALFDAQHRPIPFGA 763

Query: 754 TVKNVKQQDTGIVNDGGNVYLSGIQPGEEMIVSW 787
           +++++  +   I + GG       +    +++ W
Sbjct: 764 SLESMAGKQMAIADPGGKALALVEEDTGTLVIKW 797