Pairwise Alignments

Query, 359 a.a., permease from Pseudomonas simiae WCS417

Subject, 353 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  547 bits (1409), Expect = e-160
 Identities = 271/359 (75%), Positives = 308/359 (85%), Gaps = 6/359 (1%)

Query: 1   MAKLDRYIGSSVLIAILAVLGIILGLASLFAFIDEVGNVTDTYTVWDVLSYVGLTAPRRL 60
           MAKLDRYIG SVL+AILAVLGIILGLASLFAFIDE+G+++DTYTV +  ++V LTAPRRL
Sbjct: 1   MAKLDRYIGQSVLLAILAVLGIILGLASLFAFIDEMGDLSDTYTVMEAGNFVLLTAPRRL 60

Query: 61  YDMMPMAALIGCLIGLGSLASNSELTIMRAAGVSIGRIVWAVMKPMLLLMACSVLIGEYV 120
           Y+M+PMAALIGCLIGLGSLAS+SELTIMRAAGVSIGRIVWAVMKPML+LM   +LIGEYV
Sbjct: 61  YEMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIGEYV 120

Query: 121 APPAETTAQANRALAQGSGDAQSAKHGLWHRQGDEFIHINAVQPGGLLIGVTRYTFDKER 180
           AP  E  AQA+R+LAQG G+AQS+K G+WHRQG+E++HINAVQP GLL+GVTRY FD ER
Sbjct: 121 APVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEEYVHINAVQPDGLLLGVTRYRFDSER 180

Query: 181 HLLESSFAKRAQYSGEKWQLSDVTTTYFRNVGQGTKASTEVINVPSQEWDIALKPELLNT 240
            ++ SSFA+RAQY  + W L+DV TTYFR         TEV+N P + WD++L PELLNT
Sbjct: 181 KIVTSSFARRAQYQNDHWLLADVRTTYFRG------DHTEVVNAPEERWDVSLTPELLNT 234

Query: 241 VVMIPESLPISGLWGYIHYLKDQGLNNGRYWLAFWVKVLQPVVTAALVLMAISFIFGPLR 300
           V++ PESL I+GLW YIHYL DQGLNN RYWLAFW KVLQP+VTAALVLMAISFIFGPLR
Sbjct: 235 VILAPESLSITGLWDYIHYLSDQGLNNSRYWLAFWTKVLQPMVTAALVLMAISFIFGPLR 294

Query: 301 SVTLGQRVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPTAICALAGFWLLRRAG 359
           SVTLGQRVFTGVLVGF FRI QDLLGPSS VFGF PL AV++P  ICALAG WLLRRAG
Sbjct: 295 SVTLGQRVFTGVLVGFVFRIGQDLLGPSSQVFGFPPLLAVVIPAGICALAGVWLLRRAG 353