Pairwise Alignments

Query, 372 a.a., permease from Pseudomonas simiae WCS417

Subject, 443 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 60.8 bits (146), Expect = 7e-14
 Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 9/211 (4%)

Query: 5   RYLSREVLLTLSAVSAVLLVIIMSGRFVKYLAQAASGALDPGSLFLIMGFRLPGFLQLIL 64
           RY+     +    V  VL  +I + + ++ L    S      +   I    +P  + +I 
Sbjct: 6   RYIFSTAAVAFLGVVVVLAGMIWATQALRQLDLVTSQGQTILAFIAITSLTMPTLVLVIA 65

Query: 65  PLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAAGVALIVAWLSLGLAPQG 124
           P  LF+       +L  +SE+ V++A GM   RLL   ++ A  V+L  + L++ + P  
Sbjct: 66  PAALFIATAYTLLKLNGDSEIVVMAAAGMGPWRLLRPLILLAILVSLFCSSLAVHVVPAS 125

Query: 125 AMQFQLVLNKQDAMTEFDTLEPGRFQALNDGSRVTYTETMTDDRANLGGVFISEKRLGQD 184
              F+  + K  A       +PGRF  L  G  + +          + G+FI+      D
Sbjct: 126 LTSFREQVTKVRADVVSFVAQPGRFVNLTQG--LVFHVRERSANGVMRGIFIN------D 177

Query: 185 KKDRGISVLVADSGRQEVRPDGSRYLILENG 215
            +++ +S  +AD G Q V      +L+LENG
Sbjct: 178 AREKEVSTYLADRG-QIVESKAGIFLVLENG 207