Pairwise Alignments

Query, 255 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 520 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  213 bits (543), Expect = 5e-60
 Identities = 107/249 (42%), Positives = 163/249 (65%), Gaps = 1/249 (0%)

Query: 1   MEWLTNPEIWIAFFTLTALEIVLGIDNIIMISILVSRMPKHMQARTRIFGLALAMVTRIL 60
           MEWL +P  W+   TL  LE+VLGIDN++ I+IL  ++P   + R R+ GL+LA++ R+ 
Sbjct: 1   MEWLADPTAWLGLLTLIVLELVLGIDNLVFIAILADKLPPEQRDRARLIGLSLALLMRLG 60

Query: 61  LLLSITWVMQLTNDLFVVFGQGISGRDLILFFGGLFLLWKSSQEMYHALEGEDETHDEPK 120
           LL SI+W++ LT  LF VF +  SGRDLI+ FGG+FLL+K++ E++  LEG         
Sbjct: 61  LLASISWLVTLTQPLFEVFDKSFSGRDLIMLFGGVFLLFKATMELHERLEGH-VAQRTGN 119

Query: 121 GAGGKFIYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMVAAIVVAVLVMMLAAGTISEFI 180
            A   F   + QI ++D VFSLD+VITAVGMV  + VM+ A++V++ +M++A+  ++ F+
Sbjct: 120 VAYAMFWPIVAQIVVLDAVFSLDAVITAVGMVDELAVMMIAVIVSIGLMIVASKPLTRFV 179

Query: 181 DKHPSLKMLALSFLLVVGTVLIAESFDVHVPKGYVYFAMAFSLAVEAVNIKMRTAIAKKK 240
           + HP++ ML L FL+++G  L AE    H+PKGY+Y A+ FS+ +E  N   R+   K  
Sbjct: 180 NAHPTVIMLCLGFLMMIGFALTAEGLGFHIPKGYLYAAIGFSILIEVFNQIARSRRKKSA 239

Query: 241 KQQDPVKLR 249
           +   PV+ R
Sbjct: 240 QGVLPVRER 248